Protein–RNA interactions for Protein: A6X942

Sh2d4b, SH2 domain-containing protein 4B, mousemouse

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh2d4bA6X942 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Sh2d4bA6X942 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC16.36■□□□□ 0.21
Sh2d4bA6X942 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Sh2d4bA6X942 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC16.36■□□□□ 0.21
Sh2d4bA6X942 Gm19430-201ENSMUST00000193847 2137 ntBASIC16.36■□□□□ 0.21
Sh2d4bA6X942 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Sh2d4bA6X942 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
Sh2d4bA6X942 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Sh2d4bA6X942 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Sh2d4bA6X942 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Sh2d4bA6X942 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Sh2d4bA6X942 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Sh2d4bA6X942 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Sh2d4bA6X942 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Sh2d4bA6X942 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Sh2d4bA6X942 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Sh2d4bA6X942 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Sh2d4bA6X942 Ltc4s-202ENSMUST00000102772 649 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Sh2d4bA6X942 Mir6404-201ENSMUST00000183699 94 ntBASIC16.35■□□□□ 0.21
Sh2d4bA6X942 Wdyhv1-206ENSMUST00000227142 786 ntBASIC16.35■□□□□ 0.21
Sh2d4bA6X942 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Sh2d4bA6X942 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Sh2d4bA6X942 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Sh2d4bA6X942 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Sh2d4bA6X942 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Sh2d4bA6X942 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Sh2d4bA6X942 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Sh2d4bA6X942 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC16.35■□□□□ 0.21
Sh2d4bA6X942 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Sh2d4bA6X942 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Sh2d4bA6X942 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Sh2d4bA6X942 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Sh2d4bA6X942 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Sh2d4bA6X942 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Sh2d4bA6X942 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Sh2d4bA6X942 Fem1a-201ENSMUST00000060253 6816 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
Sh2d4bA6X942 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC16.34■□□□□ 0.21
Sh2d4bA6X942 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Sh2d4bA6X942 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
Sh2d4bA6X942 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Sh2d4bA6X942 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Sh2d4bA6X942 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Sh2d4bA6X942 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC16.34■□□□□ 0.21
Sh2d4bA6X942 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
Sh2d4bA6X942 Aimp2-202ENSMUST00000100483 1073 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Sh2d4bA6X942 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Sh2d4bA6X942 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC16.34■□□□□ 0.21
Sh2d4bA6X942 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC16.34■□□□□ 0.21
Sh2d4bA6X942 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC16.34■□□□□ 0.21
Sh2d4bA6X942 Cebpzos-202ENSMUST00000180077 602 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Sh2d4bA6X942 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC16.34■□□□□ 0.21
Sh2d4bA6X942 Aimp2-201ENSMUST00000031613 1185 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Sh2d4bA6X942 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Sh2d4bA6X942 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Sh2d4bA6X942 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC16.34■□□□□ 0.21
Sh2d4bA6X942 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Sh2d4bA6X942 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Sh2d4bA6X942 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Sh2d4bA6X942 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Sh2d4bA6X942 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
Sh2d4bA6X942 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
Sh2d4bA6X942 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.21
Sh2d4bA6X942 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC16.33■□□□□ 0.21
Sh2d4bA6X942 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Sh2d4bA6X942 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.21
Sh2d4bA6X942 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
Sh2d4bA6X942 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Sh2d4bA6X942 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Sh2d4bA6X942 Gm4609-201ENSMUST00000106443 1002 ntBASIC16.33■□□□□ 0.2
Sh2d4bA6X942 Gm5138-201ENSMUST00000113842 1002 ntBASIC16.33■□□□□ 0.2
Sh2d4bA6X942 Gm15191-201ENSMUST00000117933 1000 ntBASIC16.33■□□□□ 0.2
Sh2d4bA6X942 Gm12182-201ENSMUST00000118655 1008 ntBASIC16.33■□□□□ 0.2
Sh2d4bA6X942 Gm13882-201ENSMUST00000120886 1002 ntBASIC16.33■□□□□ 0.2
Sh2d4bA6X942 Gm10284-201ENSMUST00000145057 1005 ntBASIC16.33■□□□□ 0.2
Sh2d4bA6X942 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Sh2d4bA6X942 Gm10481-201ENSMUST00000179228 1002 ntBASIC16.33■□□□□ 0.2
Sh2d4bA6X942 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC16.33■□□□□ 0.2
Sh2d4bA6X942 Gm2574-201ENSMUST00000181051 1002 ntBASIC16.33■□□□□ 0.2
Sh2d4bA6X942 Gm3200-201ENSMUST00000181493 1002 ntBASIC16.33■□□□□ 0.2
Sh2d4bA6X942 Gm8825-201ENSMUST00000182565 998 ntBASIC16.33■□□□□ 0.2
Sh2d4bA6X942 Gm4518-201ENSMUST00000182638 718 ntBASIC16.33■□□□□ 0.2
Sh2d4bA6X942 Gm8330-201ENSMUST00000182754 1008 ntBASIC16.33■□□□□ 0.2
Sh2d4bA6X942 Gm4575-201ENSMUST00000182991 1002 ntBASIC16.33■□□□□ 0.2
Sh2d4bA6X942 Gm8709-201ENSMUST00000183230 1012 ntBASIC16.33■□□□□ 0.2
Sh2d4bA6X942 Gm10293-201ENSMUST00000076317 1002 ntBASIC16.33■□□□□ 0.2
Sh2d4bA6X942 Gm6316-201ENSMUST00000082064 1020 ntBASIC16.33■□□□□ 0.2
Sh2d4bA6X942 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Sh2d4bA6X942 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Sh2d4bA6X942 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Sh2d4bA6X942 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC16.33■□□□□ 0.2
Sh2d4bA6X942 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Sh2d4bA6X942 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Sh2d4bA6X942 Tmem2-201ENSMUST00000025663 6585 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Sh2d4bA6X942 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Sh2d4bA6X942 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Sh2d4bA6X942 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Sh2d4bA6X942 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Sh2d4bA6X942 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC16.32■□□□□ 0.2
Sh2d4bA6X942 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Sh2d4bA6X942 Tmsb10-203ENSMUST00000114050 570 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 49.1 ms