Protein–RNA interactions for Protein: A0A0G2LB96

Trbv29, T cell receptor beta, variable 29 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv29A0A0G2LB96 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Trbv29A0A0G2LB96 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trbv29A0A0G2LB96 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trbv29A0A0G2LB96 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trbv29A0A0G2LB96 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trbv29A0A0G2LB96 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trbv29A0A0G2LB96 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trbv29A0A0G2LB96 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trbv29A0A0G2LB96 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trbv29A0A0G2LB96 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trbv29A0A0G2LB96 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
Trbv29A0A0G2LB96 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC12.71□□□□□ -0.37
Trbv29A0A0G2LB96 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
Trbv29A0A0G2LB96 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trbv29A0A0G2LB96 Gm44454-201ENSMUST00000198541 138 ntBASIC12.71□□□□□ -0.37
Trbv29A0A0G2LB96 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC12.71□□□□□ -0.37
Trbv29A0A0G2LB96 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trbv29A0A0G2LB96 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trbv29A0A0G2LB96 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.38
Trbv29A0A0G2LB96 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Trbv29A0A0G2LB96 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Trbv29A0A0G2LB96 A430034D21Rik-201ENSMUST00000194339 1802 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Trbv29A0A0G2LB96 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Trbv29A0A0G2LB96 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Trbv29A0A0G2LB96 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Trbv29A0A0G2LB96 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Trbv29A0A0G2LB96 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Trbv29A0A0G2LB96 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC12.71□□□□□ -0.38
Trbv29A0A0G2LB96 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.38
Trbv29A0A0G2LB96 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Trbv29A0A0G2LB96 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trbv29A0A0G2LB96 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trbv29A0A0G2LB96 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trbv29A0A0G2LB96 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Trbv29A0A0G2LB96 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trbv29A0A0G2LB96 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Trbv29A0A0G2LB96 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trbv29A0A0G2LB96 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trbv29A0A0G2LB96 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trbv29A0A0G2LB96 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Trbv29A0A0G2LB96 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trbv29A0A0G2LB96 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Trbv29A0A0G2LB96 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC12.7□□□□□ -0.38
Trbv29A0A0G2LB96 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trbv29A0A0G2LB96 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Trbv29A0A0G2LB96 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Trbv29A0A0G2LB96 Gm29518-201ENSMUST00000190858 372 ntBASIC12.7□□□□□ -0.38
Trbv29A0A0G2LB96 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC12.7□□□□□ -0.38
Trbv29A0A0G2LB96 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC12.7□□□□□ -0.38
Trbv29A0A0G2LB96 Vti1a-206ENSMUST00000225529 1244 ntBASIC12.7□□□□□ -0.38
Trbv29A0A0G2LB96 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trbv29A0A0G2LB96 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trbv29A0A0G2LB96 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trbv29A0A0G2LB96 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Trbv29A0A0G2LB96 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC12.7□□□□□ -0.38
Trbv29A0A0G2LB96 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trbv29A0A0G2LB96 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trbv29A0A0G2LB96 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trbv29A0A0G2LB96 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trbv29A0A0G2LB96 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trbv29A0A0G2LB96 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trbv29A0A0G2LB96 Nxpe3-201ENSMUST00000099705 6430 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trbv29A0A0G2LB96 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trbv29A0A0G2LB96 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Trbv29A0A0G2LB96 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trbv29A0A0G2LB96 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC12.69□□□□□ -0.38
Trbv29A0A0G2LB96 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Trbv29A0A0G2LB96 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trbv29A0A0G2LB96 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Trbv29A0A0G2LB96 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC12.69□□□□□ -0.38
Trbv29A0A0G2LB96 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trbv29A0A0G2LB96 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trbv29A0A0G2LB96 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trbv29A0A0G2LB96 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trbv29A0A0G2LB96 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Trbv29A0A0G2LB96 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC12.69□□□□□ -0.38
Trbv29A0A0G2LB96 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trbv29A0A0G2LB96 Mir3081-201ENSMUST00000175305 84 ntBASIC12.69□□□□□ -0.38
Trbv29A0A0G2LB96 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC12.69□□□□□ -0.38
Trbv29A0A0G2LB96 Gm10252-201ENSMUST00000209541 832 ntBASIC12.69□□□□□ -0.38
Trbv29A0A0G2LB96 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Trbv29A0A0G2LB96 AC117588.1-201ENSMUST00000228510 999 ntBASIC12.69□□□□□ -0.38
Trbv29A0A0G2LB96 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trbv29A0A0G2LB96 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trbv29A0A0G2LB96 Anxa4-201ENSMUST00000001187 2002 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trbv29A0A0G2LB96 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trbv29A0A0G2LB96 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trbv29A0A0G2LB96 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trbv29A0A0G2LB96 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trbv29A0A0G2LB96 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Trbv29A0A0G2LB96 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trbv29A0A0G2LB96 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trbv29A0A0G2LB96 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC12.68□□□□□ -0.38
Trbv29A0A0G2LB96 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Trbv29A0A0G2LB96 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trbv29A0A0G2LB96 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Trbv29A0A0G2LB96 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trbv29A0A0G2LB96 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trbv29A0A0G2LB96 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trbv29A0A0G2LB96 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 33.2 ms