Protein–RNA interactions for Protein: A0A0G2JEM0

Trav3n-3, T cell receptor alpha variable 3D-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3n-3A0A0G2JEM0 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC11.61□□□□□ -0.55
Trav3n-3A0A0G2JEM0 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC11.61□□□□□ -0.55
Trav3n-3A0A0G2JEM0 Pltp-202ENSMUST00000109316 2226 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav3n-3A0A0G2JEM0 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC11.61□□□□□ -0.55
Trav3n-3A0A0G2JEM0 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Trav3n-3A0A0G2JEM0 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav3n-3A0A0G2JEM0 Gm17315-201ENSMUST00000181408 2504 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Trav3n-3A0A0G2JEM0 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC11.61□□□□□ -0.55
Trav3n-3A0A0G2JEM0 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav3n-3A0A0G2JEM0 Fbxl12-205ENSMUST00000140702 1555 ntBASIC11.61□□□□□ -0.55
Trav3n-3A0A0G2JEM0 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav3n-3A0A0G2JEM0 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
Trav3n-3A0A0G2JEM0 Gpat2-201ENSMUST00000062211 2628 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
Trav3n-3A0A0G2JEM0 Arhgap4-204ENSMUST00000114406 2749 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Trav3n-3A0A0G2JEM0 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav3n-3A0A0G2JEM0 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav3n-3A0A0G2JEM0 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Trav3n-3A0A0G2JEM0 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC11.6□□□□□ -0.55
Trav3n-3A0A0G2JEM0 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav3n-3A0A0G2JEM0 Tnpo2-201ENSMUST00000093360 4863 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav3n-3A0A0G2JEM0 Gm33195-201ENSMUST00000220827 2337 ntTSL 5 BASIC11.6□□□□□ -0.55
Trav3n-3A0A0G2JEM0 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav3n-3A0A0G2JEM0 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav3n-3A0A0G2JEM0 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC11.6□□□□□ -0.55
Trav3n-3A0A0G2JEM0 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
Trav3n-3A0A0G2JEM0 Gm28230-201ENSMUST00000053932 3527 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav3n-3A0A0G2JEM0 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav3n-3A0A0G2JEM0 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav3n-3A0A0G2JEM0 Hspb7-201ENSMUST00000102486 2769 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav3n-3A0A0G2JEM0 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav3n-3A0A0G2JEM0 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Trav3n-3A0A0G2JEM0 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav3n-3A0A0G2JEM0 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav3n-3A0A0G2JEM0 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC11.6□□□□□ -0.55
Trav3n-3A0A0G2JEM0 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Trav3n-3A0A0G2JEM0 Gm2274-201ENSMUST00000184539 609 ntBASIC11.6□□□□□ -0.55
Trav3n-3A0A0G2JEM0 AC135963.1-201ENSMUST00000211640 717 ntBASIC11.6□□□□□ -0.55
Trav3n-3A0A0G2JEM0 Arhgef33-211ENSMUST00000225658 473 ntBASIC11.6□□□□□ -0.55
Trav3n-3A0A0G2JEM0 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC11.6□□□□□ -0.55
Trav3n-3A0A0G2JEM0 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav3n-3A0A0G2JEM0 Uhrf1bp1l-201ENSMUST00000020112 6448 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav3n-3A0A0G2JEM0 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC11.6□□□□□ -0.55
Trav3n-3A0A0G2JEM0 Dmrta1-201ENSMUST00000052478 4079 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav3n-3A0A0G2JEM0 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC11.6□□□□□ -0.55
Trav3n-3A0A0G2JEM0 Rgs16-201ENSMUST00000027748 2339 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav3n-3A0A0G2JEM0 Asb18-201ENSMUST00000086882 3862 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav3n-3A0A0G2JEM0 Cacna1g-203ENSMUST00000103166 8104 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
Trav3n-3A0A0G2JEM0 Adat3-201ENSMUST00000178231 4516 ntAPPRIS P1 TSL 2 BASIC11.6□□□□□ -0.55
Trav3n-3A0A0G2JEM0 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav3n-3A0A0G2JEM0 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Trav3n-3A0A0G2JEM0 Luc7l3-209ENSMUST00000166312 5244 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Trav3n-3A0A0G2JEM0 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
Trav3n-3A0A0G2JEM0 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC11.6□□□□□ -0.55
Trav3n-3A0A0G2JEM0 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav3n-3A0A0G2JEM0 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC11.59□□□□□ -0.55
Trav3n-3A0A0G2JEM0 Asb16-201ENSMUST00000036467 2843 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav3n-3A0A0G2JEM0 Epha1-201ENSMUST00000073387 3273 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav3n-3A0A0G2JEM0 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav3n-3A0A0G2JEM0 Gpr153-202ENSMUST00000105650 3838 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
Trav3n-3A0A0G2JEM0 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav3n-3A0A0G2JEM0 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav3n-3A0A0G2JEM0 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav3n-3A0A0G2JEM0 B930092H01Rik-201ENSMUST00000213377 2678 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Trav3n-3A0A0G2JEM0 Cyp4x1os-201ENSMUST00000153951 2003 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Trav3n-3A0A0G2JEM0 Kcnj12-201ENSMUST00000041944 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav3n-3A0A0G2JEM0 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC11.59□□□□□ -0.55
Trav3n-3A0A0G2JEM0 Gm14464-201ENSMUST00000119658 1254 ntBASIC11.59□□□□□ -0.55
Trav3n-3A0A0G2JEM0 Gm12669-201ENSMUST00000122162 1009 ntBASIC11.59□□□□□ -0.55
Trav3n-3A0A0G2JEM0 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC11.59□□□□□ -0.55
Trav3n-3A0A0G2JEM0 Mir5122-201ENSMUST00000175004 89 ntBASIC11.59□□□□□ -0.55
Trav3n-3A0A0G2JEM0 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC11.59□□□□□ -0.55
Trav3n-3A0A0G2JEM0 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC11.59□□□□□ -0.55
Trav3n-3A0A0G2JEM0 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC11.59□□□□□ -0.55
Trav3n-3A0A0G2JEM0 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav3n-3A0A0G2JEM0 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav3n-3A0A0G2JEM0 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC11.59□□□□□ -0.55
Trav3n-3A0A0G2JEM0 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav3n-3A0A0G2JEM0 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav3n-3A0A0G2JEM0 Fbxo41-201ENSMUST00000159062 6505 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav3n-3A0A0G2JEM0 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
Trav3n-3A0A0G2JEM0 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
Trav3n-3A0A0G2JEM0 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav3n-3A0A0G2JEM0 Casp7-201ENSMUST00000026062 2350 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav3n-3A0A0G2JEM0 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav3n-3A0A0G2JEM0 Gpr45-203ENSMUST00000179766 3776 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.55
Trav3n-3A0A0G2JEM0 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.55
Trav3n-3A0A0G2JEM0 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav3n-3A0A0G2JEM0 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav3n-3A0A0G2JEM0 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Trav3n-3A0A0G2JEM0 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Trav3n-3A0A0G2JEM0 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav3n-3A0A0G2JEM0 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav3n-3A0A0G2JEM0 Taf2-201ENSMUST00000041733 5031 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav3n-3A0A0G2JEM0 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Trav3n-3A0A0G2JEM0 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
Trav3n-3A0A0G2JEM0 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC11.58□□□□□ -0.56
Trav3n-3A0A0G2JEM0 Gm18421-201ENSMUST00000204122 625 ntBASIC11.58□□□□□ -0.56
Trav3n-3A0A0G2JEM0 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC11.58□□□□□ -0.56
Trav3n-3A0A0G2JEM0 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC11.58□□□□□ -0.56
Trav3n-3A0A0G2JEM0 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC11.58□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 35.2 ms