Protein–RNA interactions for Protein: A0A0B4J1H2

Trbv13-3, T cell receptor beta, variable 13-3 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv13-3A0A0B4J1H2 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC11.93□□□□□ -0.5
Trbv13-3A0A0B4J1H2 Gm7556-201ENSMUST00000201178 1084 ntBASIC11.93□□□□□ -0.5
Trbv13-3A0A0B4J1H2 Gm16042-201ENSMUST00000204813 1247 ntBASIC11.93□□□□□ -0.5
Trbv13-3A0A0B4J1H2 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC11.93□□□□□ -0.5
Trbv13-3A0A0B4J1H2 CT025689.6-201ENSMUST00000224991 1104 ntBASIC11.93□□□□□ -0.5
Trbv13-3A0A0B4J1H2 Odf3b-204ENSMUST00000227834 930 ntBASIC11.93□□□□□ -0.5
Trbv13-3A0A0B4J1H2 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trbv13-3A0A0B4J1H2 Gm43738-201ENSMUST00000200659 2635 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
Trbv13-3A0A0B4J1H2 Scp2-201ENSMUST00000030340 2640 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trbv13-3A0A0B4J1H2 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trbv13-3A0A0B4J1H2 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trbv13-3A0A0B4J1H2 Igha-202ENSMUST00000194738 2540 ntAPPRIS P5 BASIC11.93□□□□□ -0.5
Trbv13-3A0A0B4J1H2 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trbv13-3A0A0B4J1H2 Sema6d-208ENSMUST00000103241 6157 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
Trbv13-3A0A0B4J1H2 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC11.92□□□□□ -0.5
Trbv13-3A0A0B4J1H2 Gm37691-201ENSMUST00000192147 2573 ntBASIC11.92□□□□□ -0.5
Trbv13-3A0A0B4J1H2 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trbv13-3A0A0B4J1H2 Prkcb-202ENSMUST00000064989 2911 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trbv13-3A0A0B4J1H2 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC11.92□□□□□ -0.5
Trbv13-3A0A0B4J1H2 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Trbv13-3A0A0B4J1H2 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC11.92□□□□□ -0.5
Trbv13-3A0A0B4J1H2 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC11.92□□□□□ -0.5
Trbv13-3A0A0B4J1H2 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trbv13-3A0A0B4J1H2 Gm44430-201ENSMUST00000203376 995 ntBASIC11.92□□□□□ -0.5
Trbv13-3A0A0B4J1H2 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC11.92□□□□□ -0.5
Trbv13-3A0A0B4J1H2 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC11.92□□□□□ -0.5
Trbv13-3A0A0B4J1H2 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trbv13-3A0A0B4J1H2 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC11.92□□□□□ -0.5
Trbv13-3A0A0B4J1H2 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC11.92□□□□□ -0.5
Trbv13-3A0A0B4J1H2 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trbv13-3A0A0B4J1H2 AC166574.6-201ENSMUST00000227889 1806 ntBASIC11.92□□□□□ -0.5
Trbv13-3A0A0B4J1H2 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trbv13-3A0A0B4J1H2 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC11.92□□□□□ -0.5
Trbv13-3A0A0B4J1H2 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Trbv13-3A0A0B4J1H2 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Trbv13-3A0A0B4J1H2 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trbv13-3A0A0B4J1H2 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trbv13-3A0A0B4J1H2 Nacc2-201ENSMUST00000028300 6378 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trbv13-3A0A0B4J1H2 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC11.91□□□□□ -0.5
Trbv13-3A0A0B4J1H2 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trbv13-3A0A0B4J1H2 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trbv13-3A0A0B4J1H2 Myef2-206ENSMUST00000142718 2942 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
Trbv13-3A0A0B4J1H2 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trbv13-3A0A0B4J1H2 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trbv13-3A0A0B4J1H2 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trbv13-3A0A0B4J1H2 Ap5m1-205ENSMUST00000227431 3757 ntBASIC11.91□□□□□ -0.5
Trbv13-3A0A0B4J1H2 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trbv13-3A0A0B4J1H2 Zfp784-201ENSMUST00000062428 2153 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trbv13-3A0A0B4J1H2 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trbv13-3A0A0B4J1H2 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trbv13-3A0A0B4J1H2 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trbv13-3A0A0B4J1H2 Egln3-201ENSMUST00000039516 2662 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trbv13-3A0A0B4J1H2 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
Trbv13-3A0A0B4J1H2 BC006965-201ENSMUST00000124028 1952 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Trbv13-3A0A0B4J1H2 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trbv13-3A0A0B4J1H2 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC11.91□□□□□ -0.5
Trbv13-3A0A0B4J1H2 Gm5643-201ENSMUST00000117081 966 ntBASIC11.91□□□□□ -0.5
Trbv13-3A0A0B4J1H2 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC11.91□□□□□ -0.5
Trbv13-3A0A0B4J1H2 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trbv13-3A0A0B4J1H2 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trbv13-3A0A0B4J1H2 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Trbv13-3A0A0B4J1H2 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC11.91□□□□□ -0.5
Trbv13-3A0A0B4J1H2 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
Trbv13-3A0A0B4J1H2 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trbv13-3A0A0B4J1H2 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trbv13-3A0A0B4J1H2 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trbv13-3A0A0B4J1H2 Zfp566-201ENSMUST00000088785 1709 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trbv13-3A0A0B4J1H2 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trbv13-3A0A0B4J1H2 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trbv13-3A0A0B4J1H2 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC11.91□□□□□ -0.5
Trbv13-3A0A0B4J1H2 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trbv13-3A0A0B4J1H2 Olfr1411-202ENSMUST00000190844 1821 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
Trbv13-3A0A0B4J1H2 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trbv13-3A0A0B4J1H2 Midn-201ENSMUST00000042057 3727 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trbv13-3A0A0B4J1H2 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trbv13-3A0A0B4J1H2 Myrf-201ENSMUST00000088013 5674 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
Trbv13-3A0A0B4J1H2 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trbv13-3A0A0B4J1H2 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
Trbv13-3A0A0B4J1H2 Gm44981-201ENSMUST00000205549 1943 ntBASIC11.9□□□□□ -0.5
Trbv13-3A0A0B4J1H2 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trbv13-3A0A0B4J1H2 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trbv13-3A0A0B4J1H2 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trbv13-3A0A0B4J1H2 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Trbv13-3A0A0B4J1H2 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trbv13-3A0A0B4J1H2 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trbv13-3A0A0B4J1H2 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC11.9□□□□□ -0.5
Trbv13-3A0A0B4J1H2 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
Trbv13-3A0A0B4J1H2 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Trbv13-3A0A0B4J1H2 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
Trbv13-3A0A0B4J1H2 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC11.9□□□□□ -0.5
Trbv13-3A0A0B4J1H2 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC11.9□□□□□ -0.5
Trbv13-3A0A0B4J1H2 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC11.9□□□□□ -0.5
Trbv13-3A0A0B4J1H2 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Trbv13-3A0A0B4J1H2 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trbv13-3A0A0B4J1H2 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trbv13-3A0A0B4J1H2 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Trbv13-3A0A0B4J1H2 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trbv13-3A0A0B4J1H2 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trbv13-3A0A0B4J1H2 Cep126-201ENSMUST00000037397 3819 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trbv13-3A0A0B4J1H2 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 28.9 ms