Protein–RNA interactions for Protein: A0A075B6C2

Trav13-4-dv7, T cell receptor alpha variable 13-4-DV7 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13-4-dv7A0A075B6C2 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC10.56□□□□□ -0.72
Trav13-4-dv7A0A075B6C2 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Trav13-4-dv7A0A075B6C2 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Trav13-4-dv7A0A075B6C2 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Trav13-4-dv7A0A075B6C2 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Trav13-4-dv7A0A075B6C2 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Trav13-4-dv7A0A075B6C2 Mtss1-201ENSMUST00000080371 4938 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Trav13-4-dv7A0A075B6C2 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Trav13-4-dv7A0A075B6C2 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Trav13-4-dv7A0A075B6C2 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Trav13-4-dv7A0A075B6C2 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Trav13-4-dv7A0A075B6C2 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Trav13-4-dv7A0A075B6C2 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Trav13-4-dv7A0A075B6C2 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC10.56□□□□□ -0.72
Trav13-4-dv7A0A075B6C2 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Trav13-4-dv7A0A075B6C2 Gm11839-201ENSMUST00000120647 1953 ntBASIC10.56□□□□□ -0.72
Trav13-4-dv7A0A075B6C2 AI593442-203ENSMUST00000213937 5674 ntAPPRIS P1 TSL 2 BASIC10.56□□□□□ -0.72
Trav13-4-dv7A0A075B6C2 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Trav13-4-dv7A0A075B6C2 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Trav13-4-dv7A0A075B6C2 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC10.55□□□□□ -0.72
Trav13-4-dv7A0A075B6C2 Gm37728-201ENSMUST00000195025 2292 ntBASIC10.55□□□□□ -0.72
Trav13-4-dv7A0A075B6C2 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Trav13-4-dv7A0A075B6C2 Blzf1-203ENSMUST00000120447 2430 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Trav13-4-dv7A0A075B6C2 Tet3-203ENSMUST00000186548 5944 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Trav13-4-dv7A0A075B6C2 Gm45779-201ENSMUST00000212189 4064 ntBASIC10.55□□□□□ -0.72
Trav13-4-dv7A0A075B6C2 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Trav13-4-dv7A0A075B6C2 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Trav13-4-dv7A0A075B6C2 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC10.55□□□□□ -0.72
Trav13-4-dv7A0A075B6C2 Gm11860-201ENSMUST00000122346 1010 ntBASIC10.55□□□□□ -0.72
Trav13-4-dv7A0A075B6C2 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Trav13-4-dv7A0A075B6C2 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC10.55□□□□□ -0.72
Trav13-4-dv7A0A075B6C2 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Trav13-4-dv7A0A075B6C2 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC10.55□□□□□ -0.72
Trav13-4-dv7A0A075B6C2 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC10.55□□□□□ -0.72
Trav13-4-dv7A0A075B6C2 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Trav13-4-dv7A0A075B6C2 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Trav13-4-dv7A0A075B6C2 Akap17b-201ENSMUST00000051906 6003 ntAPPRIS P1 TSL 5 BASIC10.55□□□□□ -0.72
Trav13-4-dv7A0A075B6C2 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Trav13-4-dv7A0A075B6C2 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Trav13-4-dv7A0A075B6C2 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Trav13-4-dv7A0A075B6C2 Bcl11b-201ENSMUST00000066060 8111 ntAPPRIS P4 TSL 1 (best) BASIC10.55□□□□□ -0.72
Trav13-4-dv7A0A075B6C2 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Trav13-4-dv7A0A075B6C2 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC10.55□□□□□ -0.72
Trav13-4-dv7A0A075B6C2 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Trav13-4-dv7A0A075B6C2 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC10.55□□□□□ -0.72
Trav13-4-dv7A0A075B6C2 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Trav13-4-dv7A0A075B6C2 Cep164-204ENSMUST00000213154 6105 ntAPPRIS ALT2 TSL 5 BASIC10.55□□□□□ -0.72
Trav13-4-dv7A0A075B6C2 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Trav13-4-dv7A0A075B6C2 Gm7669-201ENSMUST00000210184 1603 ntBASIC10.55□□□□□ -0.72
Trav13-4-dv7A0A075B6C2 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Trav13-4-dv7A0A075B6C2 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Trav13-4-dv7A0A075B6C2 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Trav13-4-dv7A0A075B6C2 Fasn-201ENSMUST00000055655 10050 ntAPPRIS P2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Trav13-4-dv7A0A075B6C2 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Trav13-4-dv7A0A075B6C2 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Trav13-4-dv7A0A075B6C2 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Trav13-4-dv7A0A075B6C2 Efs-202ENSMUST00000227037 2540 ntBASIC10.54□□□□□ -0.72
Trav13-4-dv7A0A075B6C2 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Trav13-4-dv7A0A075B6C2 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Trav13-4-dv7A0A075B6C2 Tspan11-201ENSMUST00000032501 5188 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Trav13-4-dv7A0A075B6C2 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC10.54□□□□□ -0.72
Trav13-4-dv7A0A075B6C2 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC10.54□□□□□ -0.72
Trav13-4-dv7A0A075B6C2 Arhgap20-201ENSMUST00000065496 7161 ntAPPRIS P2 TSL 5 BASIC10.54□□□□□ -0.72
Trav13-4-dv7A0A075B6C2 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Trav13-4-dv7A0A075B6C2 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Trav13-4-dv7A0A075B6C2 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Trav13-4-dv7A0A075B6C2 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC10.54□□□□□ -0.72
Trav13-4-dv7A0A075B6C2 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC10.54□□□□□ -0.72
Trav13-4-dv7A0A075B6C2 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Trav13-4-dv7A0A075B6C2 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Trav13-4-dv7A0A075B6C2 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC10.54□□□□□ -0.72
Trav13-4-dv7A0A075B6C2 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Trav13-4-dv7A0A075B6C2 Opa1-206ENSMUST00000160597 6230 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Trav13-4-dv7A0A075B6C2 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Trav13-4-dv7A0A075B6C2 Itgb3-201ENSMUST00000021028 5784 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Trav13-4-dv7A0A075B6C2 Gm8784-201ENSMUST00000222096 1435 ntBASIC10.54□□□□□ -0.72
Trav13-4-dv7A0A075B6C2 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Trav13-4-dv7A0A075B6C2 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC10.54□□□□□ -0.72
Trav13-4-dv7A0A075B6C2 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Trav13-4-dv7A0A075B6C2 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC10.54□□□□□ -0.72
Trav13-4-dv7A0A075B6C2 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC10.54□□□□□ -0.72
Trav13-4-dv7A0A075B6C2 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC10.54□□□□□ -0.72
Trav13-4-dv7A0A075B6C2 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC10.54□□□□□ -0.72
Trav13-4-dv7A0A075B6C2 Ascc3-201ENSMUST00000035606 7760 ntAPPRIS P1 TSL 5 BASIC10.54□□□□□ -0.72
Trav13-4-dv7A0A075B6C2 Foxred2-201ENSMUST00000016696 4793 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Trav13-4-dv7A0A075B6C2 Carmil3-201ENSMUST00000076236 4602 ntAPPRIS P1 TSL 2 BASIC10.54□□□□□ -0.72
Trav13-4-dv7A0A075B6C2 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC10.54□□□□□ -0.72
Trav13-4-dv7A0A075B6C2 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Trav13-4-dv7A0A075B6C2 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Trav13-4-dv7A0A075B6C2 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Trav13-4-dv7A0A075B6C2 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Trav13-4-dv7A0A075B6C2 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Trav13-4-dv7A0A075B6C2 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Trav13-4-dv7A0A075B6C2 Heg1-201ENSMUST00000126532 6714 ntAPPRIS P5 TSL 5 BASIC10.54□□□□□ -0.72
Trav13-4-dv7A0A075B6C2 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC10.54□□□□□ -0.72
Trav13-4-dv7A0A075B6C2 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC10.54□□□□□ -0.72
Trav13-4-dv7A0A075B6C2 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Trav13-4-dv7A0A075B6C2 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Trav13-4-dv7A0A075B6C2 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Trav13-4-dv7A0A075B6C2 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Retrieved 100 of 76,532 protein–RNA pairs in 51.6 ms