Protein–RNA interactions for Protein: A0A075B6B3

Trav6d-3, T cell receptor alpha variable 6D-3 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6d-3A0A075B6B3 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav6d-3A0A075B6B3 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav6d-3A0A075B6B3 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav6d-3A0A075B6B3 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav6d-3A0A075B6B3 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav6d-3A0A075B6B3 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
Trav6d-3A0A075B6B3 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav6d-3A0A075B6B3 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav6d-3A0A075B6B3 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav6d-3A0A075B6B3 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC12.28□□□□□ -0.44
Trav6d-3A0A075B6B3 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav6d-3A0A075B6B3 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC12.28□□□□□ -0.44
Trav6d-3A0A075B6B3 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav6d-3A0A075B6B3 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav6d-3A0A075B6B3 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav6d-3A0A075B6B3 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Trav6d-3A0A075B6B3 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav6d-3A0A075B6B3 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav6d-3A0A075B6B3 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav6d-3A0A075B6B3 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav6d-3A0A075B6B3 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Trav6d-3A0A075B6B3 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Trav6d-3A0A075B6B3 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Trav6d-3A0A075B6B3 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.44
Trav6d-3A0A075B6B3 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Trav6d-3A0A075B6B3 Gm45605-201ENSMUST00000210265 4269 ntBASIC12.27□□□□□ -0.44
Trav6d-3A0A075B6B3 Gm16425-201ENSMUST00000118143 3130 ntBASIC12.27□□□□□ -0.44
Trav6d-3A0A075B6B3 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Trav6d-3A0A075B6B3 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Trav6d-3A0A075B6B3 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Trav6d-3A0A075B6B3 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC12.27□□□□□ -0.44
Trav6d-3A0A075B6B3 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav6d-3A0A075B6B3 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav6d-3A0A075B6B3 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav6d-3A0A075B6B3 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav6d-3A0A075B6B3 Gm27357-201ENSMUST00000183754 135 ntBASIC12.27□□□□□ -0.45
Trav6d-3A0A075B6B3 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC12.27□□□□□ -0.45
Trav6d-3A0A075B6B3 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC12.27□□□□□ -0.45
Trav6d-3A0A075B6B3 Gm7506-201ENSMUST00000207758 815 ntBASIC12.27□□□□□ -0.45
Trav6d-3A0A075B6B3 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav6d-3A0A075B6B3 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav6d-3A0A075B6B3 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav6d-3A0A075B6B3 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav6d-3A0A075B6B3 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav6d-3A0A075B6B3 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC12.27□□□□□ -0.45
Trav6d-3A0A075B6B3 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Trav6d-3A0A075B6B3 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav6d-3A0A075B6B3 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav6d-3A0A075B6B3 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC12.27□□□□□ -0.45
Trav6d-3A0A075B6B3 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav6d-3A0A075B6B3 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav6d-3A0A075B6B3 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav6d-3A0A075B6B3 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
Trav6d-3A0A075B6B3 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
Trav6d-3A0A075B6B3 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav6d-3A0A075B6B3 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC12.27□□□□□ -0.45
Trav6d-3A0A075B6B3 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC12.27□□□□□ -0.45
Trav6d-3A0A075B6B3 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav6d-3A0A075B6B3 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Trav6d-3A0A075B6B3 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC12.26□□□□□ -0.45
Trav6d-3A0A075B6B3 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC12.26□□□□□ -0.45
Trav6d-3A0A075B6B3 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav6d-3A0A075B6B3 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav6d-3A0A075B6B3 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav6d-3A0A075B6B3 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav6d-3A0A075B6B3 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Trav6d-3A0A075B6B3 Cacng2-201ENSMUST00000019290 5510 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav6d-3A0A075B6B3 Dgkq-201ENSMUST00000053913 4938 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav6d-3A0A075B6B3 Gm15358-201ENSMUST00000119249 520 ntBASIC12.26□□□□□ -0.45
Trav6d-3A0A075B6B3 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC12.26□□□□□ -0.45
Trav6d-3A0A075B6B3 AC093926.2-201ENSMUST00000214468 1228 ntBASIC12.26□□□□□ -0.45
Trav6d-3A0A075B6B3 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC12.26□□□□□ -0.45
Trav6d-3A0A075B6B3 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav6d-3A0A075B6B3 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav6d-3A0A075B6B3 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Trav6d-3A0A075B6B3 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav6d-3A0A075B6B3 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav6d-3A0A075B6B3 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC12.26□□□□□ -0.45
Trav6d-3A0A075B6B3 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC12.26□□□□□ -0.45
Trav6d-3A0A075B6B3 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav6d-3A0A075B6B3 Impad1-201ENSMUST00000084949 6543 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav6d-3A0A075B6B3 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav6d-3A0A075B6B3 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav6d-3A0A075B6B3 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Trav6d-3A0A075B6B3 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav6d-3A0A075B6B3 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav6d-3A0A075B6B3 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav6d-3A0A075B6B3 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav6d-3A0A075B6B3 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav6d-3A0A075B6B3 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Trav6d-3A0A075B6B3 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Trav6d-3A0A075B6B3 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Trav6d-3A0A075B6B3 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav6d-3A0A075B6B3 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC12.25□□□□□ -0.45
Trav6d-3A0A075B6B3 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav6d-3A0A075B6B3 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav6d-3A0A075B6B3 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav6d-3A0A075B6B3 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Trav6d-3A0A075B6B3 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Trav6d-3A0A075B6B3 Gm8318-201ENSMUST00000182954 872 ntBASIC12.25□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 25.7 ms