Protein–RNA interactions for Protein: A0A075B6B0

Trav6d-7, T cell receptor alpha variable 6D-7 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6d-7A0A075B6B0 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav6d-7A0A075B6B0 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC11.84□□□□□ -0.51
Trav6d-7A0A075B6B0 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav6d-7A0A075B6B0 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Trav6d-7A0A075B6B0 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC11.84□□□□□ -0.51
Trav6d-7A0A075B6B0 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC11.84□□□□□ -0.51
Trav6d-7A0A075B6B0 Gm27459-201ENSMUST00000184860 107 ntBASIC11.84□□□□□ -0.51
Trav6d-7A0A075B6B0 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC11.84□□□□□ -0.51
Trav6d-7A0A075B6B0 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC11.84□□□□□ -0.51
Trav6d-7A0A075B6B0 Gm34391-201ENSMUST00000203706 907 ntBASIC11.84□□□□□ -0.51
Trav6d-7A0A075B6B0 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC11.84□□□□□ -0.51
Trav6d-7A0A075B6B0 Mzt1-203ENSMUST00000227948 952 ntBASIC11.84□□□□□ -0.51
Trav6d-7A0A075B6B0 AC114585.2-202ENSMUST00000228094 426 ntBASIC11.84□□□□□ -0.51
Trav6d-7A0A075B6B0 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav6d-7A0A075B6B0 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav6d-7A0A075B6B0 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Trav6d-7A0A075B6B0 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
Trav6d-7A0A075B6B0 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav6d-7A0A075B6B0 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav6d-7A0A075B6B0 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav6d-7A0A075B6B0 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav6d-7A0A075B6B0 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav6d-7A0A075B6B0 Fam151a-201ENSMUST00000047620 1923 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav6d-7A0A075B6B0 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Trav6d-7A0A075B6B0 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.51
Trav6d-7A0A075B6B0 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.51
Trav6d-7A0A075B6B0 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.51
Trav6d-7A0A075B6B0 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
Trav6d-7A0A075B6B0 Gm11839-201ENSMUST00000120647 1953 ntBASIC11.83□□□□□ -0.52
Trav6d-7A0A075B6B0 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav6d-7A0A075B6B0 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav6d-7A0A075B6B0 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav6d-7A0A075B6B0 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav6d-7A0A075B6B0 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC11.83□□□□□ -0.52
Trav6d-7A0A075B6B0 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Trav6d-7A0A075B6B0 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav6d-7A0A075B6B0 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav6d-7A0A075B6B0 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav6d-7A0A075B6B0 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav6d-7A0A075B6B0 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Trav6d-7A0A075B6B0 Gm44454-201ENSMUST00000198541 138 ntBASIC11.83□□□□□ -0.52
Trav6d-7A0A075B6B0 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Trav6d-7A0A075B6B0 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC11.83□□□□□ -0.52
Trav6d-7A0A075B6B0 Gm5864-201ENSMUST00000202263 970 ntBASIC11.83□□□□□ -0.52
Trav6d-7A0A075B6B0 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Trav6d-7A0A075B6B0 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav6d-7A0A075B6B0 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav6d-7A0A075B6B0 AC133598.3-202ENSMUST00000224219 531 ntBASIC11.83□□□□□ -0.52
Trav6d-7A0A075B6B0 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav6d-7A0A075B6B0 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav6d-7A0A075B6B0 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Trav6d-7A0A075B6B0 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav6d-7A0A075B6B0 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav6d-7A0A075B6B0 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav6d-7A0A075B6B0 Furin-203ENSMUST00000122232 4286 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav6d-7A0A075B6B0 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav6d-7A0A075B6B0 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC11.83□□□□□ -0.52
Trav6d-7A0A075B6B0 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC11.83□□□□□ -0.52
Trav6d-7A0A075B6B0 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav6d-7A0A075B6B0 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Trav6d-7A0A075B6B0 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav6d-7A0A075B6B0 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav6d-7A0A075B6B0 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav6d-7A0A075B6B0 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav6d-7A0A075B6B0 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC11.82□□□□□ -0.52
Trav6d-7A0A075B6B0 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav6d-7A0A075B6B0 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav6d-7A0A075B6B0 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav6d-7A0A075B6B0 Gm9768-201ENSMUST00000206007 2861 ntBASIC11.82□□□□□ -0.52
Trav6d-7A0A075B6B0 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav6d-7A0A075B6B0 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav6d-7A0A075B6B0 AC132265.1-201ENSMUST00000219233 1665 ntBASIC11.82□□□□□ -0.52
Trav6d-7A0A075B6B0 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Trav6d-7A0A075B6B0 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav6d-7A0A075B6B0 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav6d-7A0A075B6B0 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav6d-7A0A075B6B0 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav6d-7A0A075B6B0 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC11.82□□□□□ -0.52
Trav6d-7A0A075B6B0 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC11.82□□□□□ -0.52
Trav6d-7A0A075B6B0 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC11.82□□□□□ -0.52
Trav6d-7A0A075B6B0 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Trav6d-7A0A075B6B0 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC11.82□□□□□ -0.52
Trav6d-7A0A075B6B0 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav6d-7A0A075B6B0 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav6d-7A0A075B6B0 AC159301.1-201ENSMUST00000225130 1182 ntBASIC11.82□□□□□ -0.52
Trav6d-7A0A075B6B0 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav6d-7A0A075B6B0 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Trav6d-7A0A075B6B0 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav6d-7A0A075B6B0 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Trav6d-7A0A075B6B0 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Trav6d-7A0A075B6B0 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav6d-7A0A075B6B0 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC11.82□□□□□ -0.52
Trav6d-7A0A075B6B0 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Trav6d-7A0A075B6B0 Gm37912-201ENSMUST00000191895 3076 ntBASIC11.82□□□□□ -0.52
Trav6d-7A0A075B6B0 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav6d-7A0A075B6B0 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Trav6d-7A0A075B6B0 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav6d-7A0A075B6B0 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav6d-7A0A075B6B0 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Trav6d-7A0A075B6B0 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 21.3 ms