Protein–RNA interactions for Protein: A0A075B654

Trav3-4, T cell receptor alpha variable 3-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-4A0A075B654 Cacna1g-208ENSMUST00000107790 8035 ntAPPRIS ALT2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Trav3-4A0A075B654 Rubcn-203ENSMUST00000115105 5255 ntAPPRIS ALT2 TSL 5 BASIC10.33□□□□□ -0.76
Trav3-4A0A075B654 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Trav3-4A0A075B654 Cdk11b-203ENSMUST00000105600 3170 ntAPPRIS P3 TSL 5 BASIC10.33□□□□□ -0.76
Trav3-4A0A075B654 Rbm47-204ENSMUST00000113726 4703 ntAPPRIS P3 TSL 1 (best) BASIC10.33□□□□□ -0.76
Trav3-4A0A075B654 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Trav3-4A0A075B654 Dysf-213ENSMUST00000203803 6590 ntTSL 5 BASIC10.33□□□□□ -0.76
Trav3-4A0A075B654 Gm42748-201ENSMUST00000199354 2341 ntBASIC10.33□□□□□ -0.76
Trav3-4A0A075B654 Arcn1-201ENSMUST00000034607 4072 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Trav3-4A0A075B654 L1td1-204ENSMUST00000173659 2547 ntAPPRIS ALT2 TSL 2 BASIC10.33□□□□□ -0.76
Trav3-4A0A075B654 Prkcz-201ENSMUST00000030922 2641 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Trav3-4A0A075B654 Ptpn14-202ENSMUST00000097442 10746 ntAPPRIS P2 TSL 5 BASIC10.33□□□□□ -0.76
Trav3-4A0A075B654 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Trav3-4A0A075B654 Gm14464-201ENSMUST00000119658 1254 ntBASIC10.33□□□□□ -0.76
Trav3-4A0A075B654 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC10.33□□□□□ -0.76
Trav3-4A0A075B654 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC10.33□□□□□ -0.76
Trav3-4A0A075B654 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC10.33□□□□□ -0.76
Trav3-4A0A075B654 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Trav3-4A0A075B654 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Trav3-4A0A075B654 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Trav3-4A0A075B654 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Trav3-4A0A075B654 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC10.33□□□□□ -0.76
Trav3-4A0A075B654 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Trav3-4A0A075B654 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Trav3-4A0A075B654 Gpr4-201ENSMUST00000060225 2882 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Trav3-4A0A075B654 Gpsm2-201ENSMUST00000029482 3498 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Trav3-4A0A075B654 Kcnq3-201ENSMUST00000070256 11824 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Trav3-4A0A075B654 Atp13a2-201ENSMUST00000037055 3956 ntAPPRIS P3 TSL 1 (best) BASIC10.33□□□□□ -0.76
Trav3-4A0A075B654 Gm4780-202ENSMUST00000215200 2644 ntBASIC10.33□□□□□ -0.76
Trav3-4A0A075B654 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Trav3-4A0A075B654 A530083I20Rik-201ENSMUST00000180486 2421 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Trav3-4A0A075B654 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Trav3-4A0A075B654 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC10.33□□□□□ -0.76
Trav3-4A0A075B654 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Trav3-4A0A075B654 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Trav3-4A0A075B654 Sim2-201ENSMUST00000072182 3670 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Trav3-4A0A075B654 Palm2-202ENSMUST00000102905 3271 ntAPPRIS P1 TSL 5 BASIC10.32□□□□□ -0.76
Trav3-4A0A075B654 Pcnx3-202ENSMUST00000113615 7264 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Trav3-4A0A075B654 Vwa8-201ENSMUST00000040990 7054 ntAPPRIS P2 TSL 5 BASIC10.32□□□□□ -0.76
Trav3-4A0A075B654 1810030O07Rik-201ENSMUST00000060108 2699 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Trav3-4A0A075B654 Acot6-202ENSMUST00000222921 3622 ntBASIC10.32□□□□□ -0.76
Trav3-4A0A075B654 Pdgfc-201ENSMUST00000029652 3521 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Trav3-4A0A075B654 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Trav3-4A0A075B654 Spast-201ENSMUST00000024869 4672 ntAPPRIS P2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Trav3-4A0A075B654 Gm38327-201ENSMUST00000195852 1755 ntBASIC10.32□□□□□ -0.76
Trav3-4A0A075B654 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Trav3-4A0A075B654 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Trav3-4A0A075B654 Slc25a25-204ENSMUST00000113308 2643 ntTSL 5 BASIC10.32□□□□□ -0.76
Trav3-4A0A075B654 Serinc5-201ENSMUST00000049488 5366 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Trav3-4A0A075B654 Xylb-201ENSMUST00000039610 3383 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Trav3-4A0A075B654 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Trav3-4A0A075B654 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Trav3-4A0A075B654 Zfp777-201ENSMUST00000095944 3184 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Trav3-4A0A075B654 Tspyl5-201ENSMUST00000042021 4010 ntAPPRIS P1 BASIC10.32□□□□□ -0.76
Trav3-4A0A075B654 9930014A18Rik-201ENSMUST00000180730 3074 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Trav3-4A0A075B654 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Trav3-4A0A075B654 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Trav3-4A0A075B654 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Trav3-4A0A075B654 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC10.32□□□□□ -0.76
Trav3-4A0A075B654 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Trav3-4A0A075B654 Noct-203ENSMUST00000167780 2992 ntAPPRIS P2 TSL 5 BASIC10.32□□□□□ -0.76
Trav3-4A0A075B654 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Trav3-4A0A075B654 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Trav3-4A0A075B654 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC10.32□□□□□ -0.76
Trav3-4A0A075B654 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC10.32□□□□□ -0.76
Trav3-4A0A075B654 Spock1-202ENSMUST00000185502 4614 ntAPPRIS ALT1 TSL 5 BASIC10.32□□□□□ -0.76
Trav3-4A0A075B654 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Trav3-4A0A075B654 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Trav3-4A0A075B654 Kcnq1-201ENSMUST00000009689 3029 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Trav3-4A0A075B654 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Trav3-4A0A075B654 Pde4a-202ENSMUST00000039413 4653 ntAPPRIS P3 TSL 1 (best) BASIC10.32□□□□□ -0.76
Trav3-4A0A075B654 Ispd-205ENSMUST00000221895 4022 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Trav3-4A0A075B654 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Trav3-4A0A075B654 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Trav3-4A0A075B654 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Trav3-4A0A075B654 F11r-201ENSMUST00000043839 2518 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Trav3-4A0A075B654 Ermard-203ENSMUST00000097393 2535 ntAPPRIS P3 TSL 1 (best) BASIC10.32□□□□□ -0.76
Trav3-4A0A075B654 Myh2-203ENSMUST00000170159 6083 ntAPPRIS P1 TSL 5 BASIC10.32□□□□□ -0.76
Trav3-4A0A075B654 Adamts5-201ENSMUST00000023611 8091 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Trav3-4A0A075B654 2310035C23Rik-201ENSMUST00000039173 4328 ntAPPRIS P3 TSL 1 (best) BASIC10.32□□□□□ -0.76
Trav3-4A0A075B654 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC10.31□□□□□ -0.76
Trav3-4A0A075B654 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Trav3-4A0A075B654 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Trav3-4A0A075B654 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC10.31□□□□□ -0.76
Trav3-4A0A075B654 Tmprss9-201ENSMUST00000105333 3497 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Trav3-4A0A075B654 Cckar-201ENSMUST00000031093 2930 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Trav3-4A0A075B654 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Trav3-4A0A075B654 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC10.31□□□□□ -0.76
Trav3-4A0A075B654 B430305J03Rik-201ENSMUST00000066298 3702 ntAPPRIS P1 BASIC10.31□□□□□ -0.76
Trav3-4A0A075B654 Gm42878-202ENSMUST00000200170 4783 ntAPPRIS P1 TSL 2 BASIC10.31□□□□□ -0.76
Trav3-4A0A075B654 Zyg11a-203ENSMUST00000223127 2283 ntAPPRIS ALT2 TSL 5 BASIC10.31□□□□□ -0.76
Trav3-4A0A075B654 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Trav3-4A0A075B654 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Trav3-4A0A075B654 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Trav3-4A0A075B654 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Trav3-4A0A075B654 Shank2-203ENSMUST00000105902 8988 ntAPPRIS P1 TSL 5 BASIC10.31□□□□□ -0.76
Trav3-4A0A075B654 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Trav3-4A0A075B654 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Trav3-4A0A075B654 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Trav3-4A0A075B654 Armcx1-205ENSMUST00000113199 2413 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Retrieved 100 of 76,532 protein–RNA pairs in 32.6 ms