Protein–RNA interactions for Protein: A0A075B652

Trav5-4, T cell receptor alpha variable 5-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5-4A0A075B652 Crem-201ENSMUST00000025069 2931 ntTSL 5 BASIC12.82□□□□□ -0.36
Trav5-4A0A075B652 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav5-4A0A075B652 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Trav5-4A0A075B652 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav5-4A0A075B652 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Trav5-4A0A075B652 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav5-4A0A075B652 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav5-4A0A075B652 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav5-4A0A075B652 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav5-4A0A075B652 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Trav5-4A0A075B652 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav5-4A0A075B652 Hist1h2be-202ENSMUST00000091704 2480 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav5-4A0A075B652 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav5-4A0A075B652 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav5-4A0A075B652 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav5-4A0A075B652 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav5-4A0A075B652 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Trav5-4A0A075B652 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC12.82□□□□□ -0.36
Trav5-4A0A075B652 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC12.82□□□□□ -0.36
Trav5-4A0A075B652 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC12.82□□□□□ -0.36
Trav5-4A0A075B652 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC12.82□□□□□ -0.36
Trav5-4A0A075B652 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC12.82□□□□□ -0.36
Trav5-4A0A075B652 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav5-4A0A075B652 AC154471.1-201ENSMUST00000224418 436 ntBASIC12.82□□□□□ -0.36
Trav5-4A0A075B652 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav5-4A0A075B652 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav5-4A0A075B652 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav5-4A0A075B652 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Trav5-4A0A075B652 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC12.82□□□□□ -0.36
Trav5-4A0A075B652 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav5-4A0A075B652 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav5-4A0A075B652 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav5-4A0A075B652 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Trav5-4A0A075B652 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav5-4A0A075B652 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Trav5-4A0A075B652 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav5-4A0A075B652 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav5-4A0A075B652 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC12.82□□□□□ -0.36
Trav5-4A0A075B652 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Trav5-4A0A075B652 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav5-4A0A075B652 Gm44291-201ENSMUST00000203102 2865 ntBASIC12.82□□□□□ -0.36
Trav5-4A0A075B652 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav5-4A0A075B652 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav5-4A0A075B652 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav5-4A0A075B652 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Trav5-4A0A075B652 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav5-4A0A075B652 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav5-4A0A075B652 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav5-4A0A075B652 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
Trav5-4A0A075B652 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav5-4A0A075B652 Eef1e1-201ENSMUST00000001757 2553 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav5-4A0A075B652 Slc27a1-201ENSMUST00000034267 2795 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav5-4A0A075B652 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav5-4A0A075B652 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav5-4A0A075B652 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav5-4A0A075B652 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav5-4A0A075B652 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav5-4A0A075B652 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Trav5-4A0A075B652 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav5-4A0A075B652 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav5-4A0A075B652 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav5-4A0A075B652 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav5-4A0A075B652 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Trav5-4A0A075B652 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC12.81□□□□□ -0.36
Trav5-4A0A075B652 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
Trav5-4A0A075B652 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Trav5-4A0A075B652 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav5-4A0A075B652 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Trav5-4A0A075B652 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Trav5-4A0A075B652 Gm33142-201ENSMUST00000193913 867 ntBASIC12.81□□□□□ -0.36
Trav5-4A0A075B652 Gm9172-201ENSMUST00000212092 954 ntBASIC12.81□□□□□ -0.36
Trav5-4A0A075B652 AC127302.2-201ENSMUST00000215212 268 ntBASIC12.81□□□□□ -0.36
Trav5-4A0A075B652 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC12.81□□□□□ -0.36
Trav5-4A0A075B652 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC12.81□□□□□ -0.36
Trav5-4A0A075B652 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Trav5-4A0A075B652 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Trav5-4A0A075B652 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Trav5-4A0A075B652 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav5-4A0A075B652 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav5-4A0A075B652 Cd72-202ENSMUST00000098104 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav5-4A0A075B652 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav5-4A0A075B652 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Trav5-4A0A075B652 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Trav5-4A0A075B652 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
Trav5-4A0A075B652 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Trav5-4A0A075B652 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav5-4A0A075B652 Ggn-202ENSMUST00000098609 2653 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav5-4A0A075B652 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav5-4A0A075B652 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC12.81□□□□□ -0.36
Trav5-4A0A075B652 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav5-4A0A075B652 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav5-4A0A075B652 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC12.8□□□□□ -0.36
Trav5-4A0A075B652 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Trav5-4A0A075B652 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav5-4A0A075B652 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Trav5-4A0A075B652 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav5-4A0A075B652 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav5-4A0A075B652 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav5-4A0A075B652 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav5-4A0A075B652 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 32.2 ms