Protein–RNA interactions for Protein: A0A075B5I2

Trbv4, T cell receptor beta, variable 10 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv4A0A075B5I2 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trbv4A0A075B5I2 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trbv4A0A075B5I2 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
Trbv4A0A075B5I2 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trbv4A0A075B5I2 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trbv4A0A075B5I2 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trbv4A0A075B5I2 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC15.32■□□□□ 0.04
Trbv4A0A075B5I2 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Trbv4A0A075B5I2 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
Trbv4A0A075B5I2 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trbv4A0A075B5I2 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trbv4A0A075B5I2 Celf4-206ENSMUST00000224553 1729 ntBASIC15.32■□□□□ 0.04
Trbv4A0A075B5I2 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trbv4A0A075B5I2 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC15.32■□□□□ 0.04
Trbv4A0A075B5I2 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trbv4A0A075B5I2 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
Trbv4A0A075B5I2 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trbv4A0A075B5I2 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC15.32■□□□□ 0.04
Trbv4A0A075B5I2 Gm37153-201ENSMUST00000193637 231 ntBASIC15.32■□□□□ 0.04
Trbv4A0A075B5I2 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC15.32■□□□□ 0.04
Trbv4A0A075B5I2 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trbv4A0A075B5I2 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trbv4A0A075B5I2 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trbv4A0A075B5I2 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trbv4A0A075B5I2 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trbv4A0A075B5I2 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC15.32■□□□□ 0.04
Trbv4A0A075B5I2 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trbv4A0A075B5I2 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC15.32■□□□□ 0.04
Trbv4A0A075B5I2 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trbv4A0A075B5I2 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC15.32■□□□□ 0.04
Trbv4A0A075B5I2 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trbv4A0A075B5I2 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trbv4A0A075B5I2 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trbv4A0A075B5I2 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trbv4A0A075B5I2 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Trbv4A0A075B5I2 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trbv4A0A075B5I2 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trbv4A0A075B5I2 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC15.31■□□□□ 0.04
Trbv4A0A075B5I2 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trbv4A0A075B5I2 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Trbv4A0A075B5I2 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Trbv4A0A075B5I2 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC15.31■□□□□ 0.04
Trbv4A0A075B5I2 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC15.31■□□□□ 0.04
Trbv4A0A075B5I2 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC15.31■□□□□ 0.04
Trbv4A0A075B5I2 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC15.31■□□□□ 0.04
Trbv4A0A075B5I2 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trbv4A0A075B5I2 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Trbv4A0A075B5I2 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trbv4A0A075B5I2 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trbv4A0A075B5I2 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trbv4A0A075B5I2 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trbv4A0A075B5I2 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trbv4A0A075B5I2 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Trbv4A0A075B5I2 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trbv4A0A075B5I2 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trbv4A0A075B5I2 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Trbv4A0A075B5I2 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trbv4A0A075B5I2 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Trbv4A0A075B5I2 Gm29340-201ENSMUST00000188763 3854 ntBASIC15.31■□□□□ 0.04
Trbv4A0A075B5I2 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trbv4A0A075B5I2 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC15.31■□□□□ 0.04
Trbv4A0A075B5I2 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trbv4A0A075B5I2 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trbv4A0A075B5I2 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trbv4A0A075B5I2 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trbv4A0A075B5I2 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Trbv4A0A075B5I2 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Trbv4A0A075B5I2 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trbv4A0A075B5I2 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trbv4A0A075B5I2 Gm7153-201ENSMUST00000117092 455 ntBASIC15.3■□□□□ 0.04
Trbv4A0A075B5I2 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trbv4A0A075B5I2 Gm7222-201ENSMUST00000117512 906 ntBASIC15.3■□□□□ 0.04
Trbv4A0A075B5I2 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
Trbv4A0A075B5I2 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC15.3■□□□□ 0.04
Trbv4A0A075B5I2 Gm7230-201ENSMUST00000173026 815 ntBASIC15.3■□□□□ 0.04
Trbv4A0A075B5I2 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Trbv4A0A075B5I2 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Trbv4A0A075B5I2 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trbv4A0A075B5I2 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trbv4A0A075B5I2 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC15.3■□□□□ 0.04
Trbv4A0A075B5I2 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC15.3■□□□□ 0.04
Trbv4A0A075B5I2 AC151836.1-202ENSMUST00000226259 753 ntBASIC15.3■□□□□ 0.04
Trbv4A0A075B5I2 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trbv4A0A075B5I2 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trbv4A0A075B5I2 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trbv4A0A075B5I2 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Trbv4A0A075B5I2 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC15.3■□□□□ 0.04
Trbv4A0A075B5I2 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trbv4A0A075B5I2 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC15.3■□□□□ 0.04
Trbv4A0A075B5I2 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trbv4A0A075B5I2 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trbv4A0A075B5I2 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trbv4A0A075B5I2 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trbv4A0A075B5I2 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Trbv4A0A075B5I2 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trbv4A0A075B5I2 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trbv4A0A075B5I2 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC15.29■□□□□ 0.04
Trbv4A0A075B5I2 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trbv4A0A075B5I2 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC15.29■□□□□ 0.04
Trbv4A0A075B5I2 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 22.9 ms