Protein–RNA interactions for Protein: Q9WTU3

Scn8a, Sodium channel protein type 8 subunit alpha, mousemouse

Predictions only

Length 1,978 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8aQ9WTU3 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Scn8aQ9WTU3 Gm6018-201ENSMUST00000216090 1306 ntBASIC15.3■□□□□ 0.04
Scn8aQ9WTU3 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC15.3■□□□□ 0.04
Scn8aQ9WTU3 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC15.3■□□□□ 0.04
Scn8aQ9WTU3 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC15.3■□□□□ 0.04
Scn8aQ9WTU3 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC15.3■□□□□ 0.04
Scn8aQ9WTU3 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Scn8aQ9WTU3 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Scn8aQ9WTU3 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Scn8aQ9WTU3 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC15.3■□□□□ 0.04
Scn8aQ9WTU3 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Scn8aQ9WTU3 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Scn8aQ9WTU3 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Scn8aQ9WTU3 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC15.3■□□□□ 0.04
Scn8aQ9WTU3 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Scn8aQ9WTU3 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Scn8aQ9WTU3 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Scn8aQ9WTU3 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Scn8aQ9WTU3 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Scn8aQ9WTU3 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Scn8aQ9WTU3 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Scn8aQ9WTU3 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
Scn8aQ9WTU3 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC15.29■□□□□ 0.04
Scn8aQ9WTU3 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC15.29■□□□□ 0.04
Scn8aQ9WTU3 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC15.29■□□□□ 0.04
Scn8aQ9WTU3 Klk1-201ENSMUST00000075162 954 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Scn8aQ9WTU3 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Scn8aQ9WTU3 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Scn8aQ9WTU3 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Scn8aQ9WTU3 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Scn8aQ9WTU3 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Scn8aQ9WTU3 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Scn8aQ9WTU3 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Scn8aQ9WTU3 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Scn8aQ9WTU3 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Scn8aQ9WTU3 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Scn8aQ9WTU3 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Scn8aQ9WTU3 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Scn8aQ9WTU3 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Scn8aQ9WTU3 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Scn8aQ9WTU3 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Scn8aQ9WTU3 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC15.29■□□□□ 0.04
Scn8aQ9WTU3 Gm14701-201ENSMUST00000117156 348 ntBASIC15.29■□□□□ 0.04
Scn8aQ9WTU3 Gm2810-201ENSMUST00000118681 990 ntBASIC15.29■□□□□ 0.04
Scn8aQ9WTU3 Platr13-201ENSMUST00000133945 375 ntTSL 5 BASIC15.29■□□□□ 0.04
Scn8aQ9WTU3 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC15.29■□□□□ 0.04
Scn8aQ9WTU3 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Scn8aQ9WTU3 Gm16026-204ENSMUST00000162652 683 ntBASIC15.29■□□□□ 0.04
Scn8aQ9WTU3 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC15.29■□□□□ 0.04
Scn8aQ9WTU3 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC15.29■□□□□ 0.04
Scn8aQ9WTU3 C1qa-201ENSMUST00000046285 1040 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Scn8aQ9WTU3 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Scn8aQ9WTU3 Gm10313-201ENSMUST00000095320 1002 ntBASIC15.29■□□□□ 0.04
Scn8aQ9WTU3 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Scn8aQ9WTU3 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Scn8aQ9WTU3 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Scn8aQ9WTU3 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Scn8aQ9WTU3 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC15.28■□□□□ 0.04
Scn8aQ9WTU3 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Scn8aQ9WTU3 Gm8242-201ENSMUST00000193029 1420 ntBASIC15.28■□□□□ 0.04
Scn8aQ9WTU3 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Scn8aQ9WTU3 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Scn8aQ9WTU3 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Scn8aQ9WTU3 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Scn8aQ9WTU3 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Scn8aQ9WTU3 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC15.28■□□□□ 0.04
Scn8aQ9WTU3 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Scn8aQ9WTU3 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Scn8aQ9WTU3 Gm8096-201ENSMUST00000209921 1591 ntBASIC15.28■□□□□ 0.04
Scn8aQ9WTU3 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Scn8aQ9WTU3 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Scn8aQ9WTU3 Olfr1344-201ENSMUST00000168341 1061 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
Scn8aQ9WTU3 Cd3g-201ENSMUST00000002101 1023 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Scn8aQ9WTU3 Mxra8os-201ENSMUST00000097740 687 ntBASIC15.28■□□□□ 0.04
Scn8aQ9WTU3 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Scn8aQ9WTU3 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Scn8aQ9WTU3 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Scn8aQ9WTU3 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Scn8aQ9WTU3 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Scn8aQ9WTU3 Coq6-203ENSMUST00000110278 1354 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Scn8aQ9WTU3 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC15.28■□□□□ 0.04
Scn8aQ9WTU3 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Scn8aQ9WTU3 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Scn8aQ9WTU3 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Scn8aQ9WTU3 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Scn8aQ9WTU3 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC15.27■□□□□ 0.04
Scn8aQ9WTU3 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
Scn8aQ9WTU3 Gm13365-201ENSMUST00000121188 973 ntBASIC15.27■□□□□ 0.04
Scn8aQ9WTU3 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC15.27■□□□□ 0.04
Scn8aQ9WTU3 Bricd5-202ENSMUST00000164508 701 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Scn8aQ9WTU3 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC15.27■□□□□ 0.04
Scn8aQ9WTU3 1600017P15Rik-201ENSMUST00000083427 412 ntBASIC15.27■□□□□ 0.04
Scn8aQ9WTU3 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC15.27■□□□□ 0.04
Scn8aQ9WTU3 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Scn8aQ9WTU3 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Scn8aQ9WTU3 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Scn8aQ9WTU3 CT010478.1-201ENSMUST00000220747 2787 ntBASIC15.27■□□□□ 0.04
Scn8aQ9WTU3 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Scn8aQ9WTU3 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC15.27■□□□□ 0.04
Scn8aQ9WTU3 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 22.6 ms