Protein–RNA interactions for Protein: Q9R049

Amfr, E3 ubiquitin-protein ligase AMFR, mousemouse

Predictions only

Length 643 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AmfrQ9R049 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
AmfrQ9R049 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC17.15■□□□□ 0.34
AmfrQ9R049 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC17.15■□□□□ 0.34
AmfrQ9R049 Gm37584-201ENSMUST00000193595 1290 ntBASIC17.15■□□□□ 0.34
AmfrQ9R049 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
AmfrQ9R049 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
AmfrQ9R049 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
AmfrQ9R049 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
AmfrQ9R049 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
AmfrQ9R049 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
AmfrQ9R049 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
AmfrQ9R049 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
AmfrQ9R049 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
AmfrQ9R049 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
AmfrQ9R049 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
AmfrQ9R049 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
AmfrQ9R049 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC17.14■□□□□ 0.34
AmfrQ9R049 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
AmfrQ9R049 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC17.14■□□□□ 0.34
AmfrQ9R049 Gm7669-201ENSMUST00000210184 1603 ntBASIC17.14■□□□□ 0.33
AmfrQ9R049 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
AmfrQ9R049 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
AmfrQ9R049 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
AmfrQ9R049 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC17.14■□□□□ 0.33
AmfrQ9R049 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
AmfrQ9R049 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
AmfrQ9R049 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC17.14■□□□□ 0.33
AmfrQ9R049 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
AmfrQ9R049 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
AmfrQ9R049 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
AmfrQ9R049 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
AmfrQ9R049 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
AmfrQ9R049 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
AmfrQ9R049 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
AmfrQ9R049 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
AmfrQ9R049 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC17.13■□□□□ 0.33
AmfrQ9R049 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
AmfrQ9R049 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC17.13■□□□□ 0.33
AmfrQ9R049 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
AmfrQ9R049 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
AmfrQ9R049 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
AmfrQ9R049 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
AmfrQ9R049 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
AmfrQ9R049 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
AmfrQ9R049 Gm25990-201ENSMUST00000102440 86 ntBASIC17.13■□□□□ 0.33
AmfrQ9R049 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC17.13■□□□□ 0.33
AmfrQ9R049 Gm8097-201ENSMUST00000117903 829 ntBASIC17.13■□□□□ 0.33
AmfrQ9R049 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC17.13■□□□□ 0.33
AmfrQ9R049 Gm18195-201ENSMUST00000207604 706 ntBASIC17.13■□□□□ 0.33
AmfrQ9R049 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
AmfrQ9R049 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
AmfrQ9R049 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
AmfrQ9R049 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
AmfrQ9R049 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
AmfrQ9R049 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
AmfrQ9R049 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC17.13■□□□□ 0.33
AmfrQ9R049 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
AmfrQ9R049 Gm18856-201ENSMUST00000178096 1374 ntBASIC17.13■□□□□ 0.33
AmfrQ9R049 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
AmfrQ9R049 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
AmfrQ9R049 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
AmfrQ9R049 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
AmfrQ9R049 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
AmfrQ9R049 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
AmfrQ9R049 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
AmfrQ9R049 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC17.12■□□□□ 0.33
AmfrQ9R049 Adcy1-201ENSMUST00000020706 12259 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
AmfrQ9R049 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
AmfrQ9R049 Gm13418-201ENSMUST00000119097 944 ntBASIC17.12■□□□□ 0.33
AmfrQ9R049 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC17.12■□□□□ 0.33
AmfrQ9R049 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC17.12■□□□□ 0.33
AmfrQ9R049 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
AmfrQ9R049 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
AmfrQ9R049 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
AmfrQ9R049 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
AmfrQ9R049 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
AmfrQ9R049 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
AmfrQ9R049 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
AmfrQ9R049 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
AmfrQ9R049 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
AmfrQ9R049 Gm4609-201ENSMUST00000106443 1002 ntBASIC17.11■□□□□ 0.33
AmfrQ9R049 Gm5138-201ENSMUST00000113842 1002 ntBASIC17.11■□□□□ 0.33
AmfrQ9R049 Gm15191-201ENSMUST00000117933 1000 ntBASIC17.11■□□□□ 0.33
AmfrQ9R049 Gm12182-201ENSMUST00000118655 1008 ntBASIC17.11■□□□□ 0.33
AmfrQ9R049 Gm13882-201ENSMUST00000120886 1002 ntBASIC17.11■□□□□ 0.33
AmfrQ9R049 Gm10284-201ENSMUST00000145057 1005 ntBASIC17.11■□□□□ 0.33
AmfrQ9R049 Gm10481-201ENSMUST00000179228 1002 ntBASIC17.11■□□□□ 0.33
AmfrQ9R049 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC17.11■□□□□ 0.33
AmfrQ9R049 Gm2574-201ENSMUST00000181051 1002 ntBASIC17.11■□□□□ 0.33
AmfrQ9R049 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
AmfrQ9R049 Gm3200-201ENSMUST00000181493 1002 ntBASIC17.11■□□□□ 0.33
AmfrQ9R049 Gm8825-201ENSMUST00000182565 998 ntBASIC17.11■□□□□ 0.33
AmfrQ9R049 Gm4518-201ENSMUST00000182638 718 ntBASIC17.11■□□□□ 0.33
AmfrQ9R049 Gm8330-201ENSMUST00000182754 1008 ntBASIC17.11■□□□□ 0.33
AmfrQ9R049 Gm4575-201ENSMUST00000182991 1002 ntBASIC17.11■□□□□ 0.33
AmfrQ9R049 Gm8709-201ENSMUST00000183230 1012 ntBASIC17.11■□□□□ 0.33
AmfrQ9R049 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC17.11■□□□□ 0.33
AmfrQ9R049 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
AmfrQ9R049 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC17.11■□□□□ 0.33
AmfrQ9R049 Gm10293-201ENSMUST00000076317 1002 ntBASIC17.11■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 29.9 ms