Protein–RNA interactions for Protein: Q9JJZ9

Cngb3, Cyclic nucleotide-gated cation channel beta-3, mousemouse

Predictions only

Length 694 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cngb3Q9JJZ9 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cngb3Q9JJZ9 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC15.16■□□□□ 0.02
Cngb3Q9JJZ9 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cngb3Q9JJZ9 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
Cngb3Q9JJZ9 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cngb3Q9JJZ9 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cngb3Q9JJZ9 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cngb3Q9JJZ9 Gm16425-201ENSMUST00000118143 3130 ntBASIC15.15■□□□□ 0.02
Cngb3Q9JJZ9 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC15.15■□□□□ 0.02
Cngb3Q9JJZ9 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cngb3Q9JJZ9 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cngb3Q9JJZ9 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cngb3Q9JJZ9 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cngb3Q9JJZ9 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cngb3Q9JJZ9 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Cngb3Q9JJZ9 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC15.15■□□□□ 0.02
Cngb3Q9JJZ9 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cngb3Q9JJZ9 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
Cngb3Q9JJZ9 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
Cngb3Q9JJZ9 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
Cngb3Q9JJZ9 Gm27646-201ENSMUST00000183989 110 ntBASIC15.15■□□□□ 0.02
Cngb3Q9JJZ9 Gm37584-201ENSMUST00000193595 1290 ntBASIC15.15■□□□□ 0.02
Cngb3Q9JJZ9 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Cngb3Q9JJZ9 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC15.15■□□□□ 0.02
Cngb3Q9JJZ9 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC15.15■□□□□ 0.02
Cngb3Q9JJZ9 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC15.15■□□□□ 0.02
Cngb3Q9JJZ9 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cngb3Q9JJZ9 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cngb3Q9JJZ9 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC15.15■□□□□ 0.02
Cngb3Q9JJZ9 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
Cngb3Q9JJZ9 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cngb3Q9JJZ9 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Cngb3Q9JJZ9 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
Cngb3Q9JJZ9 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC15.15■□□□□ 0.02
Cngb3Q9JJZ9 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cngb3Q9JJZ9 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cngb3Q9JJZ9 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cngb3Q9JJZ9 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Cngb3Q9JJZ9 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Cngb3Q9JJZ9 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cngb3Q9JJZ9 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cngb3Q9JJZ9 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
Cngb3Q9JJZ9 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cngb3Q9JJZ9 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Cngb3Q9JJZ9 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cngb3Q9JJZ9 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
Cngb3Q9JJZ9 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cngb3Q9JJZ9 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
Cngb3Q9JJZ9 Gm8318-201ENSMUST00000182954 872 ntBASIC15.14■□□□□ 0.01
Cngb3Q9JJZ9 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Cngb3Q9JJZ9 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC15.14■□□□□ 0.01
Cngb3Q9JJZ9 AC122024.2-201ENSMUST00000220086 871 ntBASIC15.14■□□□□ 0.01
Cngb3Q9JJZ9 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cngb3Q9JJZ9 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cngb3Q9JJZ9 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Cngb3Q9JJZ9 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Cngb3Q9JJZ9 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cngb3Q9JJZ9 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Cngb3Q9JJZ9 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cngb3Q9JJZ9 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cngb3Q9JJZ9 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Cngb3Q9JJZ9 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cngb3Q9JJZ9 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Cngb3Q9JJZ9 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Cngb3Q9JJZ9 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Cngb3Q9JJZ9 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC15.13■□□□□ 0.01
Cngb3Q9JJZ9 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Cngb3Q9JJZ9 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Cngb3Q9JJZ9 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Cngb3Q9JJZ9 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Cngb3Q9JJZ9 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Cngb3Q9JJZ9 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Cngb3Q9JJZ9 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC15.13■□□□□ 0.01
Cngb3Q9JJZ9 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Cngb3Q9JJZ9 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Cngb3Q9JJZ9 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Cngb3Q9JJZ9 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Cngb3Q9JJZ9 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Cngb3Q9JJZ9 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Cngb3Q9JJZ9 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Cngb3Q9JJZ9 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Cngb3Q9JJZ9 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Cngb3Q9JJZ9 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC15.13■□□□□ 0.01
Cngb3Q9JJZ9 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Cngb3Q9JJZ9 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Cngb3Q9JJZ9 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cngb3Q9JJZ9 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cngb3Q9JJZ9 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC15.12■□□□□ 0.01
Cngb3Q9JJZ9 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cngb3Q9JJZ9 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cngb3Q9JJZ9 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cngb3Q9JJZ9 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Cngb3Q9JJZ9 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC15.12■□□□□ 0.01
Cngb3Q9JJZ9 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC15.12■□□□□ 0.01
Cngb3Q9JJZ9 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC15.12■□□□□ 0.01
Cngb3Q9JJZ9 Gm4535-201ENSMUST00000182274 558 ntBASIC15.12■□□□□ 0.01
Cngb3Q9JJZ9 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Cngb3Q9JJZ9 Gm6296-201ENSMUST00000222599 943 ntBASIC15.12■□□□□ 0.01
Cngb3Q9JJZ9 AC159301.1-201ENSMUST00000225130 1182 ntBASIC15.12■□□□□ 0.01
Cngb3Q9JJZ9 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 26.2 ms