Protein–RNA interactions for Protein: Q9ES00

Ube4b, Ubiquitin conjugation factor E4 B, mousemouse

Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube4bQ9ES00 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Ube4bQ9ES00 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC14.75□□□□□ -0.05
Ube4bQ9ES00 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Ube4bQ9ES00 AC135963.1-201ENSMUST00000211640 717 ntBASIC14.75□□□□□ -0.05
Ube4bQ9ES00 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Ube4bQ9ES00 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Ube4bQ9ES00 Kif9-204ENSMUST00000198043 2233 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Ube4bQ9ES00 Syt1-201ENSMUST00000064054 4745 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Ube4bQ9ES00 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC14.75□□□□□ -0.05
Ube4bQ9ES00 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Ube4bQ9ES00 C230004F18Rik-203ENSMUST00000137153 2138 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Ube4bQ9ES00 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Ube4bQ9ES00 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC14.75□□□□□ -0.05
Ube4bQ9ES00 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Ube4bQ9ES00 Mpped1-203ENSMUST00000109470 3281 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Ube4bQ9ES00 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC14.75□□□□□ -0.05
Ube4bQ9ES00 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
Ube4bQ9ES00 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Ube4bQ9ES00 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC14.74□□□□□ -0.05
Ube4bQ9ES00 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Ube4bQ9ES00 Trmt10c-201ENSMUST00000059052 3002 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Ube4bQ9ES00 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Ube4bQ9ES00 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Ube4bQ9ES00 Ntrk2-209ENSMUST00000225950 2640 ntBASIC14.74□□□□□ -0.05
Ube4bQ9ES00 Igsf8-204ENSMUST00000139528 2866 ntTSL 2 BASIC14.74□□□□□ -0.05
Ube4bQ9ES00 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Ube4bQ9ES00 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
Ube4bQ9ES00 Mtrr-209ENSMUST00000223398 3861 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Ube4bQ9ES00 Gm43509-201ENSMUST00000196551 2594 ntBASIC14.74□□□□□ -0.05
Ube4bQ9ES00 Tspyl1-201ENSMUST00000061372 3086 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
Ube4bQ9ES00 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC14.74□□□□□ -0.05
Ube4bQ9ES00 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Ube4bQ9ES00 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Ube4bQ9ES00 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC14.74□□□□□ -0.05
Ube4bQ9ES00 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Ube4bQ9ES00 Tmem184a-201ENSMUST00000044002 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Ube4bQ9ES00 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Ube4bQ9ES00 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Ube4bQ9ES00 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Ube4bQ9ES00 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Ube4bQ9ES00 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Ube4bQ9ES00 Aste1-201ENSMUST00000035181 2755 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
Ube4bQ9ES00 Eif4ebp2-201ENSMUST00000020288 5784 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Ube4bQ9ES00 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Ube4bQ9ES00 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC14.73□□□□□ -0.05
Ube4bQ9ES00 Zfyve27-207ENSMUST00000169536 5611 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
Ube4bQ9ES00 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
Ube4bQ9ES00 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Ube4bQ9ES00 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Ube4bQ9ES00 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Ube4bQ9ES00 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Ube4bQ9ES00 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Ube4bQ9ES00 Ankrd33b-204ENSMUST00000123325 7466 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Ube4bQ9ES00 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
Ube4bQ9ES00 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Ube4bQ9ES00 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
Ube4bQ9ES00 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
Ube4bQ9ES00 Actl10-202ENSMUST00000226583 1501 ntBASIC14.73□□□□□ -0.05
Ube4bQ9ES00 Prkg1-202ENSMUST00000073581 2841 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Ube4bQ9ES00 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC14.73□□□□□ -0.05
Ube4bQ9ES00 Rbm34-201ENSMUST00000045994 3424 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Ube4bQ9ES00 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC14.73□□□□□ -0.05
Ube4bQ9ES00 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC14.73□□□□□ -0.05
Ube4bQ9ES00 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC14.73□□□□□ -0.05
Ube4bQ9ES00 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC14.73□□□□□ -0.05
Ube4bQ9ES00 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC14.73□□□□□ -0.05
Ube4bQ9ES00 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Ube4bQ9ES00 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Ube4bQ9ES00 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Ube4bQ9ES00 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
Ube4bQ9ES00 Crem-201ENSMUST00000025069 2931 ntTSL 5 BASIC14.73□□□□□ -0.05
Ube4bQ9ES00 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Ube4bQ9ES00 Gm20546-201ENSMUST00000173141 1889 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Ube4bQ9ES00 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Ube4bQ9ES00 Cct4-204ENSMUST00000173867 2484 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Ube4bQ9ES00 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Ube4bQ9ES00 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Ube4bQ9ES00 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Ube4bQ9ES00 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Ube4bQ9ES00 Cpne4-201ENSMUST00000057742 3959 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Ube4bQ9ES00 Gtf2ird1-205ENSMUST00000100654 3156 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Ube4bQ9ES00 Cplx2-201ENSMUST00000026985 4928 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
Ube4bQ9ES00 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC14.73□□□□□ -0.05
Ube4bQ9ES00 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Ube4bQ9ES00 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Ube4bQ9ES00 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC14.72□□□□□ -0.05
Ube4bQ9ES00 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC14.72□□□□□ -0.05
Ube4bQ9ES00 Pramel1-201ENSMUST00000037419 2794 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Ube4bQ9ES00 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Ube4bQ9ES00 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Ube4bQ9ES00 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC14.72□□□□□ -0.05
Ube4bQ9ES00 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
Ube4bQ9ES00 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Ube4bQ9ES00 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC14.72□□□□□ -0.05
Ube4bQ9ES00 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC14.72□□□□□ -0.05
Ube4bQ9ES00 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Ube4bQ9ES00 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Ube4bQ9ES00 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
Ube4bQ9ES00 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Ube4bQ9ES00 Gtf2ird1-201ENSMUST00000073161 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 28.6 ms