Protein–RNA interactions for Protein: Q9ER80

Rtp4, Receptor-transporting protein 4, mousemouse

Known RBP Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtp4Q9ER80 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rtp4Q9ER80 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Rtp4Q9ER80 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC14.35□□□□□ -0.11
Rtp4Q9ER80 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Rtp4Q9ER80 Gm12260-201ENSMUST00000122447 411 ntBASIC14.35□□□□□ -0.11
Rtp4Q9ER80 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rtp4Q9ER80 Gm27646-201ENSMUST00000183989 110 ntBASIC14.35□□□□□ -0.11
Rtp4Q9ER80 Gm43073-201ENSMUST00000198200 1189 ntBASIC14.35□□□□□ -0.11
Rtp4Q9ER80 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC14.35□□□□□ -0.11
Rtp4Q9ER80 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rtp4Q9ER80 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rtp4Q9ER80 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rtp4Q9ER80 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rtp4Q9ER80 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC14.35□□□□□ -0.11
Rtp4Q9ER80 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rtp4Q9ER80 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Rtp4Q9ER80 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rtp4Q9ER80 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Rtp4Q9ER80 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rtp4Q9ER80 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
Rtp4Q9ER80 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rtp4Q9ER80 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC14.34□□□□□ -0.11
Rtp4Q9ER80 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Rtp4Q9ER80 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rtp4Q9ER80 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC14.34□□□□□ -0.11
Rtp4Q9ER80 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rtp4Q9ER80 Gm8784-201ENSMUST00000222096 1435 ntBASIC14.34□□□□□ -0.11
Rtp4Q9ER80 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rtp4Q9ER80 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rtp4Q9ER80 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rtp4Q9ER80 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC14.34□□□□□ -0.11
Rtp4Q9ER80 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rtp4Q9ER80 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Rtp4Q9ER80 Gm15467-201ENSMUST00000120582 445 ntBASIC14.34□□□□□ -0.11
Rtp4Q9ER80 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC14.34□□□□□ -0.11
Rtp4Q9ER80 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC14.34□□□□□ -0.11
Rtp4Q9ER80 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC14.34□□□□□ -0.11
Rtp4Q9ER80 Gm43935-201ENSMUST00000203569 1050 ntBASIC14.34□□□□□ -0.11
Rtp4Q9ER80 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Rtp4Q9ER80 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rtp4Q9ER80 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Rtp4Q9ER80 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Rtp4Q9ER80 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Rtp4Q9ER80 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rtp4Q9ER80 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC14.33□□□□□ -0.11
Rtp4Q9ER80 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Rtp4Q9ER80 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Rtp4Q9ER80 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.11
Rtp4Q9ER80 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC14.33□□□□□ -0.12
Rtp4Q9ER80 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rtp4Q9ER80 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rtp4Q9ER80 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rtp4Q9ER80 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rtp4Q9ER80 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rtp4Q9ER80 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rtp4Q9ER80 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rtp4Q9ER80 Gm14140-201ENSMUST00000119999 995 ntBASIC14.33□□□□□ -0.12
Rtp4Q9ER80 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC14.33□□□□□ -0.12
Rtp4Q9ER80 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC14.33□□□□□ -0.12
Rtp4Q9ER80 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC14.33□□□□□ -0.12
Rtp4Q9ER80 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Rtp4Q9ER80 AC117588.1-201ENSMUST00000228510 999 ntBASIC14.33□□□□□ -0.12
Rtp4Q9ER80 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rtp4Q9ER80 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rtp4Q9ER80 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rtp4Q9ER80 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rtp4Q9ER80 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Rtp4Q9ER80 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rtp4Q9ER80 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rtp4Q9ER80 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Rtp4Q9ER80 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Rtp4Q9ER80 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Rtp4Q9ER80 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rtp4Q9ER80 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Rtp4Q9ER80 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rtp4Q9ER80 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC14.32□□□□□ -0.12
Rtp4Q9ER80 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Rtp4Q9ER80 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC14.32□□□□□ -0.12
Rtp4Q9ER80 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rtp4Q9ER80 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Rtp4Q9ER80 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rtp4Q9ER80 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rtp4Q9ER80 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Rtp4Q9ER80 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rtp4Q9ER80 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rtp4Q9ER80 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rtp4Q9ER80 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rtp4Q9ER80 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Rtp4Q9ER80 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rtp4Q9ER80 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC14.32□□□□□ -0.12
Rtp4Q9ER80 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rtp4Q9ER80 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rtp4Q9ER80 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC14.32□□□□□ -0.12
Rtp4Q9ER80 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Rtp4Q9ER80 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC14.32□□□□□ -0.12
Rtp4Q9ER80 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rtp4Q9ER80 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rtp4Q9ER80 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Rtp4Q9ER80 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Rtp4Q9ER80 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 33.1 ms