Protein–RNA interactions for Protein: Q9EQM3

Nkx2-4, Homeobox protein Nkx-2.4, mousemouse

Predictions only

Length 354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-4Q9EQM3 Gm36756-203ENSMUST00000223029 1166 ntTSL 5 BASIC15.65■□□□□ 0.1
Nkx2-4Q9EQM3 AC149294.4-201ENSMUST00000227870 882 ntBASIC15.65■□□□□ 0.1
Nkx2-4Q9EQM3 Gm6180-201ENSMUST00000065243 498 ntBASIC15.65■□□□□ 0.1
Nkx2-4Q9EQM3 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Nkx2-4Q9EQM3 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Nkx2-4Q9EQM3 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC15.65■□□□□ 0.1
Nkx2-4Q9EQM3 Rbfox2-206ENSMUST00000227314 1810 ntBASIC15.65■□□□□ 0.1
Nkx2-4Q9EQM3 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
Nkx2-4Q9EQM3 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Nkx2-4Q9EQM3 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Nkx2-4Q9EQM3 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Nkx2-4Q9EQM3 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC15.65■□□□□ 0.1
Nkx2-4Q9EQM3 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
Nkx2-4Q9EQM3 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC15.64■□□□□ 0.1
Nkx2-4Q9EQM3 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Nkx2-4Q9EQM3 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Nkx2-4Q9EQM3 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC15.64■□□□□ 0.09
Nkx2-4Q9EQM3 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Nkx2-4Q9EQM3 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Nkx2-4Q9EQM3 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Nkx2-4Q9EQM3 Gm24694-201ENSMUST00000180054 110 ntBASIC15.64■□□□□ 0.09
Nkx2-4Q9EQM3 Gsg1l2-202ENSMUST00000181566 1158 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
Nkx2-4Q9EQM3 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC15.64■□□□□ 0.09
Nkx2-4Q9EQM3 Gm27663-201ENSMUST00000184839 110 ntBASIC15.64■□□□□ 0.09
Nkx2-4Q9EQM3 Gm8515-201ENSMUST00000194852 576 ntBASIC15.64■□□□□ 0.09
Nkx2-4Q9EQM3 Hnrnph2-201ENSMUST00000050331 1701 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
Nkx2-4Q9EQM3 Pdlim7-203ENSMUST00000069968 1006 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Nkx2-4Q9EQM3 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Nkx2-4Q9EQM3 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Nkx2-4Q9EQM3 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Nkx2-4Q9EQM3 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Nkx2-4Q9EQM3 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Nkx2-4Q9EQM3 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Nkx2-4Q9EQM3 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC15.63■□□□□ 0.09
Nkx2-4Q9EQM3 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Nkx2-4Q9EQM3 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC15.63■□□□□ 0.09
Nkx2-4Q9EQM3 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Nkx2-4Q9EQM3 Gm4204-201ENSMUST00000110798 1231 ntBASIC15.63■□□□□ 0.09
Nkx2-4Q9EQM3 Snrnp27-202ENSMUST00000113683 1005 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Nkx2-4Q9EQM3 Orai3-202ENSMUST00000118865 768 ntTSL 3 BASIC15.63■□□□□ 0.09
Nkx2-4Q9EQM3 Akirin1-ps-201ENSMUST00000119676 458 ntBASIC15.63■□□□□ 0.09
Nkx2-4Q9EQM3 Gm16194-204ENSMUST00000141797 475 ntTSL 3 BASIC15.63■□□□□ 0.09
Nkx2-4Q9EQM3 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Nkx2-4Q9EQM3 Gm36979-201ENSMUST00000193616 539 ntTSL 5 BASIC15.63■□□□□ 0.09
Nkx2-4Q9EQM3 Gm45059-201ENSMUST00000205558 1077 ntBASIC15.63■□□□□ 0.09
Nkx2-4Q9EQM3 Tspan3-203ENSMUST00000215906 842 ntTSL 3 BASIC15.63■□□□□ 0.09
Nkx2-4Q9EQM3 Cradd-202ENSMUST00000217809 1115 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Nkx2-4Q9EQM3 Ap2s1-201ENSMUST00000086112 836 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Nkx2-4Q9EQM3 Gm7669-201ENSMUST00000210184 1603 ntBASIC15.63■□□□□ 0.09
Nkx2-4Q9EQM3 Plekha1-202ENSMUST00000075181 2301 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Nkx2-4Q9EQM3 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
Nkx2-4Q9EQM3 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Nkx2-4Q9EQM3 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Nkx2-4Q9EQM3 Gm43338-201ENSMUST00000198617 2223 ntBASIC15.63■□□□□ 0.09
Nkx2-4Q9EQM3 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Nkx2-4Q9EQM3 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Nkx2-4Q9EQM3 Pde7b-206ENSMUST00000170265 1380 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
Nkx2-4Q9EQM3 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC15.62■□□□□ 0.09
Nkx2-4Q9EQM3 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Nkx2-4Q9EQM3 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Nkx2-4Q9EQM3 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Nkx2-4Q9EQM3 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Nkx2-4Q9EQM3 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Nkx2-4Q9EQM3 Gm8839-201ENSMUST00000121279 1645 ntBASIC15.62■□□□□ 0.09
Nkx2-4Q9EQM3 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Nkx2-4Q9EQM3 Rnd1-202ENSMUST00000109149 1034 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Nkx2-4Q9EQM3 Gm7030-203ENSMUST00000173322 913 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Nkx2-4Q9EQM3 Mir7085-201ENSMUST00000184353 66 ntBASIC15.62■□□□□ 0.09
Nkx2-4Q9EQM3 Gm29542-201ENSMUST00000186876 704 ntTSL 3 BASIC15.62■□□□□ 0.09
Nkx2-4Q9EQM3 AC159619.3-201ENSMUST00000222694 473 ntTSL 5 BASIC15.62■□□□□ 0.09
Nkx2-4Q9EQM3 Mzt2-201ENSMUST00000023351 1035 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Nkx2-4Q9EQM3 Gm7030-201ENSMUST00000046131 913 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
Nkx2-4Q9EQM3 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC15.62■□□□□ 0.09
Nkx2-4Q9EQM3 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC15.62■□□□□ 0.09
Nkx2-4Q9EQM3 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC15.62■□□□□ 0.09
Nkx2-4Q9EQM3 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
Nkx2-4Q9EQM3 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Nkx2-4Q9EQM3 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Nkx2-4Q9EQM3 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Nkx2-4Q9EQM3 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Nkx2-4Q9EQM3 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
Nkx2-4Q9EQM3 Gm43702-201ENSMUST00000198772 2546 ntBASIC15.61■□□□□ 0.09
Nkx2-4Q9EQM3 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Nkx2-4Q9EQM3 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Nkx2-4Q9EQM3 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Nkx2-4Q9EQM3 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Nkx2-4Q9EQM3 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Nkx2-4Q9EQM3 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Nkx2-4Q9EQM3 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Nkx2-4Q9EQM3 Gm15222-201ENSMUST00000127359 344 ntTSL 3 BASIC15.61■□□□□ 0.09
Nkx2-4Q9EQM3 Gm12212-201ENSMUST00000141032 378 ntTSL 3 BASIC15.61■□□□□ 0.09
Nkx2-4Q9EQM3 Fbxw4-204ENSMUST00000160018 931 ntTSL 3 BASIC15.61■□□□□ 0.09
Nkx2-4Q9EQM3 Gm8602-201ENSMUST00000184045 607 ntBASIC15.61■□□□□ 0.09
Nkx2-4Q9EQM3 Gm29667-201ENSMUST00000190817 490 ntBASIC15.61■□□□□ 0.09
Nkx2-4Q9EQM3 Klk2-ps-201ENSMUST00000205342 571 ntBASIC15.61■□□□□ 0.09
Nkx2-4Q9EQM3 CT010506.4-201ENSMUST00000225457 351 ntBASIC15.61■□□□□ 0.09
Nkx2-4Q9EQM3 1700020A23Rik-201ENSMUST00000028898 712 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Nkx2-4Q9EQM3 Hfe-201ENSMUST00000006787 516 ntTSL 5 BASIC15.61■□□□□ 0.09
Nkx2-4Q9EQM3 Hfe-203ENSMUST00000091707 816 ntTSL 5 BASIC15.61■□□□□ 0.09
Nkx2-4Q9EQM3 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 26.1 ms