Protein–RNA interactions for Protein: Q9EQH3

Vps35, Vacuolar protein sorting-associated protein 35, mousemouse

Known RBP Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps35Q9EQH3 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Vps35Q9EQH3 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC15.35■□□□□ 0.05
Vps35Q9EQH3 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Vps35Q9EQH3 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Vps35Q9EQH3 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC15.35■□□□□ 0.05
Vps35Q9EQH3 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC15.35■□□□□ 0.05
Vps35Q9EQH3 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Vps35Q9EQH3 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Vps35Q9EQH3 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
Vps35Q9EQH3 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Vps35Q9EQH3 Gm7222-201ENSMUST00000117512 906 ntBASIC15.35■□□□□ 0.05
Vps35Q9EQH3 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Vps35Q9EQH3 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Vps35Q9EQH3 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC15.35■□□□□ 0.05
Vps35Q9EQH3 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
Vps35Q9EQH3 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC15.35■□□□□ 0.05
Vps35Q9EQH3 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC15.35■□□□□ 0.05
Vps35Q9EQH3 Tead1-201ENSMUST00000059768 9964 ntAPPRIS P4 TSL 1 (best) BASIC15.35■□□□□ 0.05
Vps35Q9EQH3 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC15.35■□□□□ 0.05
Vps35Q9EQH3 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC15.35■□□□□ 0.05
Vps35Q9EQH3 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Vps35Q9EQH3 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Vps35Q9EQH3 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Vps35Q9EQH3 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
Vps35Q9EQH3 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Vps35Q9EQH3 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Vps35Q9EQH3 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Vps35Q9EQH3 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Vps35Q9EQH3 Prkcz2-201ENSMUST00000206136 1756 ntBASIC15.34■□□□□ 0.05
Vps35Q9EQH3 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Vps35Q9EQH3 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Vps35Q9EQH3 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC15.34■□□□□ 0.05
Vps35Q9EQH3 Gm6550-201ENSMUST00000187574 993 ntBASIC15.34■□□□□ 0.05
Vps35Q9EQH3 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC15.34■□□□□ 0.05
Vps35Q9EQH3 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Vps35Q9EQH3 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Vps35Q9EQH3 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Vps35Q9EQH3 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
Vps35Q9EQH3 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Vps35Q9EQH3 Kif21a-201ENSMUST00000067205 6307 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Vps35Q9EQH3 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Vps35Q9EQH3 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Vps35Q9EQH3 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Vps35Q9EQH3 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Vps35Q9EQH3 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.05
Vps35Q9EQH3 Nat8f3-201ENSMUST00000050780 1821 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Vps35Q9EQH3 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.05
Vps35Q9EQH3 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Vps35Q9EQH3 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Vps35Q9EQH3 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.05
Vps35Q9EQH3 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.05
Vps35Q9EQH3 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Vps35Q9EQH3 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Vps35Q9EQH3 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Vps35Q9EQH3 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Vps35Q9EQH3 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Vps35Q9EQH3 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Vps35Q9EQH3 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
Vps35Q9EQH3 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Vps35Q9EQH3 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
Vps35Q9EQH3 Gm15173-201ENSMUST00000122049 433 ntBASIC15.33■□□□□ 0.04
Vps35Q9EQH3 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC15.33■□□□□ 0.04
Vps35Q9EQH3 Gm2308-201ENSMUST00000166539 1004 ntBASIC15.33■□□□□ 0.04
Vps35Q9EQH3 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC15.33■□□□□ 0.04
Vps35Q9EQH3 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC15.33■□□□□ 0.04
Vps35Q9EQH3 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC15.33■□□□□ 0.04
Vps35Q9EQH3 AC133598.3-202ENSMUST00000224219 531 ntBASIC15.33■□□□□ 0.04
Vps35Q9EQH3 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
Vps35Q9EQH3 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Vps35Q9EQH3 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC15.33■□□□□ 0.04
Vps35Q9EQH3 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Vps35Q9EQH3 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
Vps35Q9EQH3 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Vps35Q9EQH3 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Vps35Q9EQH3 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Vps35Q9EQH3 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Vps35Q9EQH3 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Vps35Q9EQH3 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Vps35Q9EQH3 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC15.32■□□□□ 0.04
Vps35Q9EQH3 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Vps35Q9EQH3 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Vps35Q9EQH3 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
Vps35Q9EQH3 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Vps35Q9EQH3 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Vps35Q9EQH3 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC15.32■□□□□ 0.04
Vps35Q9EQH3 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Vps35Q9EQH3 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Vps35Q9EQH3 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Vps35Q9EQH3 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC15.32■□□□□ 0.04
Vps35Q9EQH3 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Vps35Q9EQH3 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Vps35Q9EQH3 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC15.32■□□□□ 0.04
Vps35Q9EQH3 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Vps35Q9EQH3 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC15.32■□□□□ 0.04
Vps35Q9EQH3 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC15.32■□□□□ 0.04
Vps35Q9EQH3 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Vps35Q9EQH3 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Vps35Q9EQH3 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Vps35Q9EQH3 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Vps35Q9EQH3 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 42.9 ms