Protein–RNA interactions for Protein: Q9EQG9

Col4a3bp, Collagen type IV alpha-3-binding protein, mousemouse

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a3bpQ9EQG9 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Col4a3bpQ9EQG9 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Col4a3bpQ9EQG9 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Col4a3bpQ9EQG9 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC17.55■□□□□ 0.4
Col4a3bpQ9EQG9 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Col4a3bpQ9EQG9 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Col4a3bpQ9EQG9 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Col4a3bpQ9EQG9 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Col4a3bpQ9EQG9 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Col4a3bpQ9EQG9 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Col4a3bpQ9EQG9 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC17.55■□□□□ 0.4
Col4a3bpQ9EQG9 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Col4a3bpQ9EQG9 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC17.55■□□□□ 0.4
Col4a3bpQ9EQG9 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC17.55■□□□□ 0.4
Col4a3bpQ9EQG9 Gm6376-201ENSMUST00000209407 580 ntBASIC17.55■□□□□ 0.4
Col4a3bpQ9EQG9 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Col4a3bpQ9EQG9 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Col4a3bpQ9EQG9 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Col4a3bpQ9EQG9 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Col4a3bpQ9EQG9 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Col4a3bpQ9EQG9 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Col4a3bpQ9EQG9 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC17.54■□□□□ 0.4
Col4a3bpQ9EQG9 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC17.54■□□□□ 0.4
Col4a3bpQ9EQG9 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Col4a3bpQ9EQG9 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
Col4a3bpQ9EQG9 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Col4a3bpQ9EQG9 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Col4a3bpQ9EQG9 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Col4a3bpQ9EQG9 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Col4a3bpQ9EQG9 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Col4a3bpQ9EQG9 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Col4a3bpQ9EQG9 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
Col4a3bpQ9EQG9 Gm8344-201ENSMUST00000119813 856 ntBASIC17.54■□□□□ 0.4
Col4a3bpQ9EQG9 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC17.54■□□□□ 0.4
Col4a3bpQ9EQG9 Gm7286-201ENSMUST00000182691 1007 ntBASIC17.54■□□□□ 0.4
Col4a3bpQ9EQG9 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC17.54■□□□□ 0.4
Col4a3bpQ9EQG9 Gm44771-201ENSMUST00000206975 626 ntBASIC17.54■□□□□ 0.4
Col4a3bpQ9EQG9 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC17.54■□□□□ 0.4
Col4a3bpQ9EQG9 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Col4a3bpQ9EQG9 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC17.54■□□□□ 0.4
Col4a3bpQ9EQG9 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Col4a3bpQ9EQG9 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Col4a3bpQ9EQG9 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
Col4a3bpQ9EQG9 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Col4a3bpQ9EQG9 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Col4a3bpQ9EQG9 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Col4a3bpQ9EQG9 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Col4a3bpQ9EQG9 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Col4a3bpQ9EQG9 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Col4a3bpQ9EQG9 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Col4a3bpQ9EQG9 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Col4a3bpQ9EQG9 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Col4a3bpQ9EQG9 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC17.53■□□□□ 0.4
Col4a3bpQ9EQG9 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Col4a3bpQ9EQG9 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Col4a3bpQ9EQG9 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Col4a3bpQ9EQG9 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Col4a3bpQ9EQG9 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC17.53■□□□□ 0.4
Col4a3bpQ9EQG9 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC17.53■□□□□ 0.4
Col4a3bpQ9EQG9 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Col4a3bpQ9EQG9 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC17.53■□□□□ 0.4
Col4a3bpQ9EQG9 AC158538.2-201ENSMUST00000225455 906 ntBASIC17.53■□□□□ 0.4
Col4a3bpQ9EQG9 Rbfox2-207ENSMUST00000227533 1041 ntBASIC17.53■□□□□ 0.4
Col4a3bpQ9EQG9 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Col4a3bpQ9EQG9 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Col4a3bpQ9EQG9 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Col4a3bpQ9EQG9 Gm37728-201ENSMUST00000195025 2292 ntBASIC17.52■□□□□ 0.4
Col4a3bpQ9EQG9 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Col4a3bpQ9EQG9 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC17.52■□□□□ 0.4
Col4a3bpQ9EQG9 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Col4a3bpQ9EQG9 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Col4a3bpQ9EQG9 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Col4a3bpQ9EQG9 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Col4a3bpQ9EQG9 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Col4a3bpQ9EQG9 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Col4a3bpQ9EQG9 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Col4a3bpQ9EQG9 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC17.52■□□□□ 0.4
Col4a3bpQ9EQG9 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC17.52■□□□□ 0.4
Col4a3bpQ9EQG9 AC161829.1-201ENSMUST00000220298 281 ntBASIC17.52■□□□□ 0.4
Col4a3bpQ9EQG9 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Col4a3bpQ9EQG9 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Col4a3bpQ9EQG9 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Col4a3bpQ9EQG9 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Col4a3bpQ9EQG9 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Col4a3bpQ9EQG9 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Col4a3bpQ9EQG9 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC17.52■□□□□ 0.39
Col4a3bpQ9EQG9 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Col4a3bpQ9EQG9 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.39
Col4a3bpQ9EQG9 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Col4a3bpQ9EQG9 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.39
Col4a3bpQ9EQG9 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Col4a3bpQ9EQG9 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Col4a3bpQ9EQG9 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Col4a3bpQ9EQG9 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Col4a3bpQ9EQG9 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Col4a3bpQ9EQG9 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
Col4a3bpQ9EQG9 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Col4a3bpQ9EQG9 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
Col4a3bpQ9EQG9 Gm18195-201ENSMUST00000207604 706 ntBASIC17.51■□□□□ 0.39
Col4a3bpQ9EQG9 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC17.51■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 48.3 ms