Protein–RNA interactions for Protein: Q9D883

U2af1, Splicing factor U2AF 35 kDa subunit, mousemouse

Known RBP Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
U2af1Q9D883 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC20.1■□□□□ 0.81
U2af1Q9D883 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
U2af1Q9D883 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
U2af1Q9D883 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
U2af1Q9D883 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
U2af1Q9D883 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
U2af1Q9D883 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
U2af1Q9D883 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC20.1■□□□□ 0.81
U2af1Q9D883 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC20.1■□□□□ 0.81
U2af1Q9D883 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC20.1■□□□□ 0.81
U2af1Q9D883 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC20.1■□□□□ 0.81
U2af1Q9D883 Gm37935-201ENSMUST00000192012 982 ntBASIC20.1■□□□□ 0.81
U2af1Q9D883 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
U2af1Q9D883 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
U2af1Q9D883 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
U2af1Q9D883 Gm16011-201ENSMUST00000121567 2662 ntBASIC20.1■□□□□ 0.81
U2af1Q9D883 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
U2af1Q9D883 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
U2af1Q9D883 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
U2af1Q9D883 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
U2af1Q9D883 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
U2af1Q9D883 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
U2af1Q9D883 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
U2af1Q9D883 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
U2af1Q9D883 Gm27528-202ENSMUST00000222916 2012 ntBASIC20.09■□□□□ 0.81
U2af1Q9D883 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
U2af1Q9D883 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
U2af1Q9D883 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
U2af1Q9D883 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
U2af1Q9D883 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
U2af1Q9D883 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
U2af1Q9D883 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
U2af1Q9D883 Mir7036b-201ENSMUST00000184791 63 ntBASIC20.09■□□□□ 0.81
U2af1Q9D883 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC20.09■□□□□ 0.81
U2af1Q9D883 CT943659.1-201ENSMUST00000215459 326 ntBASIC20.09■□□□□ 0.81
U2af1Q9D883 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
U2af1Q9D883 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
U2af1Q9D883 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
U2af1Q9D883 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
U2af1Q9D883 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
U2af1Q9D883 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
U2af1Q9D883 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
U2af1Q9D883 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
U2af1Q9D883 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
U2af1Q9D883 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
U2af1Q9D883 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
U2af1Q9D883 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC20.08■□□□□ 0.81
U2af1Q9D883 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
U2af1Q9D883 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC20.08■□□□□ 0.81
U2af1Q9D883 Gm25911-201ENSMUST00000157621 56 ntBASIC20.08■□□□□ 0.81
U2af1Q9D883 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
U2af1Q9D883 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
U2af1Q9D883 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
U2af1Q9D883 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.8
U2af1Q9D883 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.8
U2af1Q9D883 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.8
U2af1Q9D883 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
U2af1Q9D883 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
U2af1Q9D883 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
U2af1Q9D883 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
U2af1Q9D883 Aimp2-202ENSMUST00000100483 1073 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
U2af1Q9D883 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
U2af1Q9D883 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
U2af1Q9D883 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC20.07■□□□□ 0.8
U2af1Q9D883 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC20.07■□□□□ 0.8
U2af1Q9D883 Gm5177-201ENSMUST00000183092 997 ntBASIC20.07■□□□□ 0.8
U2af1Q9D883 Gm44492-201ENSMUST00000197012 141 ntBASIC20.07■□□□□ 0.8
U2af1Q9D883 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
U2af1Q9D883 Aimp2-201ENSMUST00000031613 1185 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
U2af1Q9D883 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
U2af1Q9D883 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
U2af1Q9D883 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
U2af1Q9D883 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
U2af1Q9D883 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC20.07■□□□□ 0.8
U2af1Q9D883 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
U2af1Q9D883 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
U2af1Q9D883 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC20.07■□□□□ 0.8
U2af1Q9D883 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
U2af1Q9D883 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
U2af1Q9D883 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
U2af1Q9D883 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
U2af1Q9D883 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
U2af1Q9D883 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
U2af1Q9D883 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
U2af1Q9D883 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
U2af1Q9D883 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
U2af1Q9D883 H2af-ps-201ENSMUST00000119066 295 ntBASIC20.06■□□□□ 0.8
U2af1Q9D883 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
U2af1Q9D883 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC20.06■□□□□ 0.8
U2af1Q9D883 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC20.06■□□□□ 0.8
U2af1Q9D883 Gm2213-201ENSMUST00000197485 688 ntBASIC20.06■□□□□ 0.8
U2af1Q9D883 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC20.06■□□□□ 0.8
U2af1Q9D883 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
U2af1Q9D883 AC154572.2-201ENSMUST00000225105 997 ntBASIC20.06■□□□□ 0.8
U2af1Q9D883 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
U2af1Q9D883 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
U2af1Q9D883 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
U2af1Q9D883 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
U2af1Q9D883 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC20.06■□□□□ 0.8
U2af1Q9D883 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 24.1 ms