Protein–RNA interactions for Protein: Q9D439

Cfap53, Cilia- and flagella-associated protein 53, mousemouse

Predictions only

Length 514 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cfap53Q9D439 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Cfap53Q9D439 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC16.82■□□□□ 0.28
Cfap53Q9D439 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Cfap53Q9D439 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Cfap53Q9D439 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Cfap53Q9D439 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Cfap53Q9D439 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Cfap53Q9D439 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Cfap53Q9D439 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Cfap53Q9D439 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Cfap53Q9D439 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Cfap53Q9D439 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC16.82■□□□□ 0.28
Cfap53Q9D439 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Cfap53Q9D439 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Cfap53Q9D439 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Cfap53Q9D439 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
Cfap53Q9D439 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Cfap53Q9D439 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Cfap53Q9D439 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Cfap53Q9D439 Gm45212-201ENSMUST00000205831 3403 ntBASIC16.82■□□□□ 0.28
Cfap53Q9D439 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Cfap53Q9D439 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Cfap53Q9D439 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Cfap53Q9D439 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Cfap53Q9D439 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC16.81■□□□□ 0.28
Cfap53Q9D439 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Cfap53Q9D439 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Cfap53Q9D439 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Cfap53Q9D439 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Cfap53Q9D439 Foxo3-203ENSMUST00000105502 6848 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Cfap53Q9D439 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Cfap53Q9D439 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Cfap53Q9D439 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Cfap53Q9D439 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Cfap53Q9D439 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC16.81■□□□□ 0.28
Cfap53Q9D439 Gm44357-201ENSMUST00000195897 142 ntBASIC16.81■□□□□ 0.28
Cfap53Q9D439 Gm19658-201ENSMUST00000196231 138 ntBASIC16.81■□□□□ 0.28
Cfap53Q9D439 Gm44367-201ENSMUST00000196836 138 ntBASIC16.81■□□□□ 0.28
Cfap53Q9D439 Gm44350-201ENSMUST00000197197 138 ntBASIC16.81■□□□□ 0.28
Cfap53Q9D439 Gm44390-201ENSMUST00000197533 144 ntBASIC16.81■□□□□ 0.28
Cfap53Q9D439 Gm44313-201ENSMUST00000198018 138 ntBASIC16.81■□□□□ 0.28
Cfap53Q9D439 Gm44486-201ENSMUST00000198508 138 ntBASIC16.81■□□□□ 0.28
Cfap53Q9D439 Gm44314-201ENSMUST00000199263 138 ntBASIC16.81■□□□□ 0.28
Cfap53Q9D439 Gm44394-201ENSMUST00000199558 138 ntBASIC16.81■□□□□ 0.28
Cfap53Q9D439 Gm44484-201ENSMUST00000199873 138 ntBASIC16.81■□□□□ 0.28
Cfap53Q9D439 Gm44466-201ENSMUST00000200264 138 ntBASIC16.81■□□□□ 0.28
Cfap53Q9D439 Gm44359-201ENSMUST00000200671 138 ntBASIC16.81■□□□□ 0.28
Cfap53Q9D439 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
Cfap53Q9D439 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Cfap53Q9D439 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Cfap53Q9D439 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Cfap53Q9D439 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Cfap53Q9D439 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Cfap53Q9D439 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Cfap53Q9D439 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Cfap53Q9D439 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Cfap53Q9D439 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cfap53Q9D439 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cfap53Q9D439 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
Cfap53Q9D439 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cfap53Q9D439 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cfap53Q9D439 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cfap53Q9D439 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cfap53Q9D439 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC16.8■□□□□ 0.28
Cfap53Q9D439 Gm13418-201ENSMUST00000119097 944 ntBASIC16.8■□□□□ 0.28
Cfap53Q9D439 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC16.8■□□□□ 0.28
Cfap53Q9D439 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC16.8■□□□□ 0.28
Cfap53Q9D439 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC16.8■□□□□ 0.28
Cfap53Q9D439 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cfap53Q9D439 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cfap53Q9D439 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC16.8■□□□□ 0.28
Cfap53Q9D439 Rps4l-201ENSMUST00000071745 943 ntBASIC16.8■□□□□ 0.28
Cfap53Q9D439 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cfap53Q9D439 Grk6-207ENSMUST00000225925 2769 ntBASIC16.8■□□□□ 0.28
Cfap53Q9D439 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Cfap53Q9D439 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cfap53Q9D439 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cfap53Q9D439 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cfap53Q9D439 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cfap53Q9D439 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cfap53Q9D439 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
Cfap53Q9D439 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Cfap53Q9D439 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cfap53Q9D439 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
Cfap53Q9D439 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Cfap53Q9D439 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Cfap53Q9D439 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Cfap53Q9D439 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Cfap53Q9D439 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Cfap53Q9D439 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Cfap53Q9D439 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Cfap53Q9D439 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Cfap53Q9D439 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Cfap53Q9D439 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC16.79■□□□□ 0.28
Cfap53Q9D439 Gm11780-201ENSMUST00000136880 516 ntBASIC16.79■□□□□ 0.28
Cfap53Q9D439 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC16.79■□□□□ 0.28
Cfap53Q9D439 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC16.79■□□□□ 0.28
Cfap53Q9D439 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC16.79■□□□□ 0.28
Cfap53Q9D439 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC16.79■□□□□ 0.28
Cfap53Q9D439 Gm6296-201ENSMUST00000222599 943 ntBASIC16.79■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 35.6 ms