Protein–RNA interactions for Protein: Q9D1C8

Vps28, Vacuolar protein sorting-associated protein 28 homolog, mousemouse

Predictions only

Length 221 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps28Q9D1C8 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC15.69■□□□□ 0.1
Vps28Q9D1C8 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Vps28Q9D1C8 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC15.69■□□□□ 0.1
Vps28Q9D1C8 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC15.69■□□□□ 0.1
Vps28Q9D1C8 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC15.69■□□□□ 0.1
Vps28Q9D1C8 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Vps28Q9D1C8 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC15.69■□□□□ 0.1
Vps28Q9D1C8 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Vps28Q9D1C8 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Vps28Q9D1C8 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Vps28Q9D1C8 St8sia6-201ENSMUST00000003509 7618 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Vps28Q9D1C8 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Vps28Q9D1C8 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Vps28Q9D1C8 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC15.69■□□□□ 0.1
Vps28Q9D1C8 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Vps28Q9D1C8 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
Vps28Q9D1C8 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Vps28Q9D1C8 AC122901.1-201ENSMUST00000214203 1790 ntBASIC15.69■□□□□ 0.1
Vps28Q9D1C8 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Vps28Q9D1C8 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Vps28Q9D1C8 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Vps28Q9D1C8 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Vps28Q9D1C8 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Vps28Q9D1C8 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Vps28Q9D1C8 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Vps28Q9D1C8 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Vps28Q9D1C8 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Vps28Q9D1C8 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Vps28Q9D1C8 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Vps28Q9D1C8 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Vps28Q9D1C8 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Vps28Q9D1C8 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
Vps28Q9D1C8 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Vps28Q9D1C8 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC15.68■□□□□ 0.1
Vps28Q9D1C8 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC15.68■□□□□ 0.1
Vps28Q9D1C8 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC15.68■□□□□ 0.1
Vps28Q9D1C8 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Vps28Q9D1C8 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
Vps28Q9D1C8 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Vps28Q9D1C8 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Vps28Q9D1C8 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Vps28Q9D1C8 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Vps28Q9D1C8 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC15.68■□□□□ 0.1
Vps28Q9D1C8 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Vps28Q9D1C8 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC15.68■□□□□ 0.1
Vps28Q9D1C8 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Vps28Q9D1C8 AC163637.1-201ENSMUST00000215491 1894 ntBASIC15.67■□□□□ 0.1
Vps28Q9D1C8 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Vps28Q9D1C8 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Vps28Q9D1C8 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Vps28Q9D1C8 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Vps28Q9D1C8 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Vps28Q9D1C8 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC15.67■□□□□ 0.1
Vps28Q9D1C8 Gm27528-202ENSMUST00000222916 2012 ntBASIC15.67■□□□□ 0.1
Vps28Q9D1C8 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC15.67■□□□□ 0.1
Vps28Q9D1C8 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Vps28Q9D1C8 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Vps28Q9D1C8 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Vps28Q9D1C8 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Vps28Q9D1C8 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Vps28Q9D1C8 AC131709.1-201ENSMUST00000224731 1180 ntBASIC15.67■□□□□ 0.1
Vps28Q9D1C8 AC159093.1-201ENSMUST00000227779 380 ntBASIC15.67■□□□□ 0.1
Vps28Q9D1C8 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Vps28Q9D1C8 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Vps28Q9D1C8 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC15.67■□□□□ 0.1
Vps28Q9D1C8 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Vps28Q9D1C8 Camsap1-201ENSMUST00000091268 7978 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Vps28Q9D1C8 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Vps28Q9D1C8 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Vps28Q9D1C8 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Vps28Q9D1C8 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Vps28Q9D1C8 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
Vps28Q9D1C8 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
Vps28Q9D1C8 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Vps28Q9D1C8 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Vps28Q9D1C8 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
Vps28Q9D1C8 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Vps28Q9D1C8 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Vps28Q9D1C8 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Vps28Q9D1C8 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Vps28Q9D1C8 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Vps28Q9D1C8 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Vps28Q9D1C8 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Vps28Q9D1C8 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC15.66■□□□□ 0.1
Vps28Q9D1C8 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Vps28Q9D1C8 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Vps28Q9D1C8 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC15.66■□□□□ 0.1
Vps28Q9D1C8 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC15.66■□□□□ 0.1
Vps28Q9D1C8 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Vps28Q9D1C8 Gm12260-201ENSMUST00000122447 411 ntBASIC15.66■□□□□ 0.1
Vps28Q9D1C8 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC15.66■□□□□ 0.1
Vps28Q9D1C8 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC15.66■□□□□ 0.1
Vps28Q9D1C8 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Vps28Q9D1C8 Gm4899-201ENSMUST00000178708 719 ntBASIC15.66■□□□□ 0.1
Vps28Q9D1C8 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Vps28Q9D1C8 AC160980.1-201ENSMUST00000224136 970 ntBASIC15.66■□□□□ 0.1
Vps28Q9D1C8 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Vps28Q9D1C8 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Vps28Q9D1C8 Igdcc4-202ENSMUST00000077696 6361 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
Vps28Q9D1C8 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 23.6 ms