Protein–RNA interactions for Protein: Q9CYB0

Trim13, E3 ubiquitin-protein ligase TRIM13, mousemouse

Predictions only

Length 407 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim13Q9CYB0 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trim13Q9CYB0 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Trim13Q9CYB0 Cul5-209ENSMUST00000166367 5942 ntTSL 5 BASIC14.18□□□□□ -0.14
Trim13Q9CYB0 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trim13Q9CYB0 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trim13Q9CYB0 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trim13Q9CYB0 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC14.18□□□□□ -0.14
Trim13Q9CYB0 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trim13Q9CYB0 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Trim13Q9CYB0 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC14.18□□□□□ -0.14
Trim13Q9CYB0 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Trim13Q9CYB0 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Trim13Q9CYB0 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
Trim13Q9CYB0 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trim13Q9CYB0 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Trim13Q9CYB0 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC14.18□□□□□ -0.14
Trim13Q9CYB0 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Trim13Q9CYB0 Xpot-201ENSMUST00000039810 5992 ntTSL 5 BASIC14.18□□□□□ -0.14
Trim13Q9CYB0 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trim13Q9CYB0 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC14.18□□□□□ -0.14
Trim13Q9CYB0 Cacna1g-207ENSMUST00000107789 8383 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Trim13Q9CYB0 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trim13Q9CYB0 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trim13Q9CYB0 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trim13Q9CYB0 Zfp319-201ENSMUST00000057717 7232 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trim13Q9CYB0 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trim13Q9CYB0 Gm45133-201ENSMUST00000207548 2773 ntBASIC14.17□□□□□ -0.14
Trim13Q9CYB0 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trim13Q9CYB0 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trim13Q9CYB0 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trim13Q9CYB0 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trim13Q9CYB0 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Trim13Q9CYB0 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Trim13Q9CYB0 Nid2-201ENSMUST00000022340 4876 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trim13Q9CYB0 Chml-201ENSMUST00000104984 6905 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Trim13Q9CYB0 Chml-202ENSMUST00000209720 6905 ntTSL 5 BASIC14.17□□□□□ -0.14
Trim13Q9CYB0 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Trim13Q9CYB0 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trim13Q9CYB0 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC14.17□□□□□ -0.14
Trim13Q9CYB0 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trim13Q9CYB0 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Trim13Q9CYB0 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Trim13Q9CYB0 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Trim13Q9CYB0 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Trim13Q9CYB0 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Trim13Q9CYB0 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Trim13Q9CYB0 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Trim13Q9CYB0 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trim13Q9CYB0 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC14.17□□□□□ -0.14
Trim13Q9CYB0 Gm45058-201ENSMUST00000205810 766 ntBASIC14.17□□□□□ -0.14
Trim13Q9CYB0 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trim13Q9CYB0 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC14.17□□□□□ -0.14
Trim13Q9CYB0 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trim13Q9CYB0 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trim13Q9CYB0 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trim13Q9CYB0 Gm9987-201ENSMUST00000069768 567 ntBASIC14.17□□□□□ -0.14
Trim13Q9CYB0 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Trim13Q9CYB0 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC14.17□□□□□ -0.14
Trim13Q9CYB0 Endov-202ENSMUST00000106244 5070 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trim13Q9CYB0 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Trim13Q9CYB0 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trim13Q9CYB0 Gm16425-201ENSMUST00000118143 3130 ntBASIC14.17□□□□□ -0.14
Trim13Q9CYB0 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trim13Q9CYB0 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trim13Q9CYB0 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
Trim13Q9CYB0 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trim13Q9CYB0 Evc-201ENSMUST00000031005 4325 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trim13Q9CYB0 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trim13Q9CYB0 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trim13Q9CYB0 Pde4dip-205ENSMUST00000168438 8264 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trim13Q9CYB0 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trim13Q9CYB0 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trim13Q9CYB0 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trim13Q9CYB0 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC14.16□□□□□ -0.14
Trim13Q9CYB0 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Trim13Q9CYB0 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC14.16□□□□□ -0.14
Trim13Q9CYB0 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Trim13Q9CYB0 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Trim13Q9CYB0 Lmx1b-201ENSMUST00000041730 4790 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trim13Q9CYB0 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trim13Q9CYB0 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC14.16□□□□□ -0.14
Trim13Q9CYB0 Kif5c-201ENSMUST00000028102 6856 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trim13Q9CYB0 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Trim13Q9CYB0 Ap5m1-205ENSMUST00000227431 3757 ntBASIC14.16□□□□□ -0.14
Trim13Q9CYB0 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Trim13Q9CYB0 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC14.16□□□□□ -0.14
Trim13Q9CYB0 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trim13Q9CYB0 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Trim13Q9CYB0 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trim13Q9CYB0 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Trim13Q9CYB0 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trim13Q9CYB0 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trim13Q9CYB0 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trim13Q9CYB0 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trim13Q9CYB0 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Trim13Q9CYB0 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Trim13Q9CYB0 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Trim13Q9CYB0 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trim13Q9CYB0 Gm9768-201ENSMUST00000206007 2861 ntBASIC14.15□□□□□ -0.14
Trim13Q9CYB0 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC14.15□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 51.9 ms