Protein–RNA interactions for Protein: Q9CRC8

Lrrc40, Leucine-rich repeat-containing protein 40, mousemouse

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrrc40Q9CRC8 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Lrrc40Q9CRC8 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Lrrc40Q9CRC8 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Lrrc40Q9CRC8 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC15.22■□□□□ 0.03
Lrrc40Q9CRC8 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Lrrc40Q9CRC8 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Lrrc40Q9CRC8 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Lrrc40Q9CRC8 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Lrrc40Q9CRC8 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC15.22■□□□□ 0.03
Lrrc40Q9CRC8 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC15.22■□□□□ 0.03
Lrrc40Q9CRC8 Gm37584-201ENSMUST00000193595 1290 ntBASIC15.22■□□□□ 0.03
Lrrc40Q9CRC8 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Lrrc40Q9CRC8 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC15.22■□□□□ 0.03
Lrrc40Q9CRC8 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC15.22■□□□□ 0.03
Lrrc40Q9CRC8 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Lrrc40Q9CRC8 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
Lrrc40Q9CRC8 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Lrrc40Q9CRC8 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Lrrc40Q9CRC8 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Lrrc40Q9CRC8 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Lrrc40Q9CRC8 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Lrrc40Q9CRC8 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC15.22■□□□□ 0.03
Lrrc40Q9CRC8 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
Lrrc40Q9CRC8 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Lrrc40Q9CRC8 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Lrrc40Q9CRC8 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Lrrc40Q9CRC8 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Lrrc40Q9CRC8 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Lrrc40Q9CRC8 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Lrrc40Q9CRC8 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Lrrc40Q9CRC8 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
Lrrc40Q9CRC8 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Lrrc40Q9CRC8 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
Lrrc40Q9CRC8 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Lrrc40Q9CRC8 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Lrrc40Q9CRC8 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Lrrc40Q9CRC8 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Lrrc40Q9CRC8 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
Lrrc40Q9CRC8 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Lrrc40Q9CRC8 Eml5-210ENSMUST00000223282 7595 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
Lrrc40Q9CRC8 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Lrrc40Q9CRC8 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Lrrc40Q9CRC8 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
Lrrc40Q9CRC8 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Lrrc40Q9CRC8 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Lrrc40Q9CRC8 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
Lrrc40Q9CRC8 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC15.21■□□□□ 0.03
Lrrc40Q9CRC8 Gm4535-201ENSMUST00000182274 558 ntBASIC15.21■□□□□ 0.03
Lrrc40Q9CRC8 Gm30437-201ENSMUST00000206086 1201 ntBASIC15.21■□□□□ 0.03
Lrrc40Q9CRC8 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Lrrc40Q9CRC8 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Lrrc40Q9CRC8 Gm10355-201ENSMUST00000097146 517 ntBASIC15.21■□□□□ 0.03
Lrrc40Q9CRC8 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
Lrrc40Q9CRC8 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Lrrc40Q9CRC8 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC15.21■□□□□ 0.03
Lrrc40Q9CRC8 Gm43352-201ENSMUST00000196419 3065 ntBASIC15.21■□□□□ 0.03
Lrrc40Q9CRC8 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Lrrc40Q9CRC8 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Lrrc40Q9CRC8 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Lrrc40Q9CRC8 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC15.21■□□□□ 0.02
Lrrc40Q9CRC8 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.02
Lrrc40Q9CRC8 AC157650.3-201ENSMUST00000225058 1476 ntBASIC15.2■□□□□ 0.02
Lrrc40Q9CRC8 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Lrrc40Q9CRC8 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Lrrc40Q9CRC8 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC15.2■□□□□ 0.02
Lrrc40Q9CRC8 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Lrrc40Q9CRC8 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Lrrc40Q9CRC8 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Lrrc40Q9CRC8 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Lrrc40Q9CRC8 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Lrrc40Q9CRC8 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Lrrc40Q9CRC8 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Lrrc40Q9CRC8 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
Lrrc40Q9CRC8 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
Lrrc40Q9CRC8 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC15.2■□□□□ 0.02
Lrrc40Q9CRC8 Gm6296-201ENSMUST00000222599 943 ntBASIC15.2■□□□□ 0.02
Lrrc40Q9CRC8 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Lrrc40Q9CRC8 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Lrrc40Q9CRC8 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Lrrc40Q9CRC8 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Lrrc40Q9CRC8 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Lrrc40Q9CRC8 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
Lrrc40Q9CRC8 Grk6-207ENSMUST00000225925 2769 ntBASIC15.2■□□□□ 0.02
Lrrc40Q9CRC8 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Lrrc40Q9CRC8 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Lrrc40Q9CRC8 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC15.2■□□□□ 0.02
Lrrc40Q9CRC8 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Lrrc40Q9CRC8 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Lrrc40Q9CRC8 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Lrrc40Q9CRC8 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Lrrc40Q9CRC8 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Lrrc40Q9CRC8 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC15.19■□□□□ 0.02
Lrrc40Q9CRC8 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC15.19■□□□□ 0.02
Lrrc40Q9CRC8 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC15.19■□□□□ 0.02
Lrrc40Q9CRC8 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Lrrc40Q9CRC8 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
Lrrc40Q9CRC8 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Lrrc40Q9CRC8 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
Lrrc40Q9CRC8 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Lrrc40Q9CRC8 Gm11780-201ENSMUST00000136880 516 ntBASIC15.19■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 65.2 ms