Protein–RNA interactions for Protein: Q9CQV4

Retreg3, Reticulophagy regulator 3, mousemouse

Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Retreg3Q9CQV4 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Retreg3Q9CQV4 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Retreg3Q9CQV4 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC15.43■□□□□ 0.06
Retreg3Q9CQV4 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC15.43■□□□□ 0.06
Retreg3Q9CQV4 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Retreg3Q9CQV4 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
Retreg3Q9CQV4 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Retreg3Q9CQV4 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Retreg3Q9CQV4 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Retreg3Q9CQV4 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC15.43■□□□□ 0.06
Retreg3Q9CQV4 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC15.43■□□□□ 0.06
Retreg3Q9CQV4 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC15.43■□□□□ 0.06
Retreg3Q9CQV4 Gm6736-201ENSMUST00000166583 948 ntBASIC15.43■□□□□ 0.06
Retreg3Q9CQV4 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC15.43■□□□□ 0.06
Retreg3Q9CQV4 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Retreg3Q9CQV4 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Retreg3Q9CQV4 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Retreg3Q9CQV4 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
Retreg3Q9CQV4 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
Retreg3Q9CQV4 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC15.43■□□□□ 0.06
Retreg3Q9CQV4 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Retreg3Q9CQV4 Tfap2a-203ENSMUST00000223869 2037 ntBASIC15.43■□□□□ 0.06
Retreg3Q9CQV4 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Retreg3Q9CQV4 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Retreg3Q9CQV4 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Retreg3Q9CQV4 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Retreg3Q9CQV4 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Retreg3Q9CQV4 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC15.42■□□□□ 0.06
Retreg3Q9CQV4 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Retreg3Q9CQV4 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Retreg3Q9CQV4 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Retreg3Q9CQV4 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
Retreg3Q9CQV4 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Retreg3Q9CQV4 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Retreg3Q9CQV4 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Retreg3Q9CQV4 Gnat3-201ENSMUST00000030561 1361 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Retreg3Q9CQV4 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
Retreg3Q9CQV4 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Retreg3Q9CQV4 Gm7222-201ENSMUST00000117512 906 ntBASIC15.42■□□□□ 0.06
Retreg3Q9CQV4 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC15.42■□□□□ 0.06
Retreg3Q9CQV4 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Retreg3Q9CQV4 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC15.42■□□□□ 0.06
Retreg3Q9CQV4 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Retreg3Q9CQV4 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC15.42■□□□□ 0.06
Retreg3Q9CQV4 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC15.42■□□□□ 0.06
Retreg3Q9CQV4 Gm37436-201ENSMUST00000193842 1085 ntBASIC15.42■□□□□ 0.06
Retreg3Q9CQV4 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Retreg3Q9CQV4 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Retreg3Q9CQV4 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Retreg3Q9CQV4 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Retreg3Q9CQV4 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
Retreg3Q9CQV4 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Retreg3Q9CQV4 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Retreg3Q9CQV4 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Retreg3Q9CQV4 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Retreg3Q9CQV4 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
Retreg3Q9CQV4 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC15.42■□□□□ 0.06
Retreg3Q9CQV4 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC15.42■□□□□ 0.06
Retreg3Q9CQV4 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC15.42■□□□□ 0.06
Retreg3Q9CQV4 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC15.42■□□□□ 0.06
Retreg3Q9CQV4 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Retreg3Q9CQV4 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Retreg3Q9CQV4 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Retreg3Q9CQV4 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Retreg3Q9CQV4 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Retreg3Q9CQV4 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Retreg3Q9CQV4 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Retreg3Q9CQV4 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Retreg3Q9CQV4 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Retreg3Q9CQV4 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Retreg3Q9CQV4 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Retreg3Q9CQV4 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Retreg3Q9CQV4 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Retreg3Q9CQV4 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Retreg3Q9CQV4 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Retreg3Q9CQV4 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
Retreg3Q9CQV4 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC15.41■□□□□ 0.06
Retreg3Q9CQV4 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC15.41■□□□□ 0.06
Retreg3Q9CQV4 Gm5264-201ENSMUST00000190584 848 ntBASIC15.41■□□□□ 0.06
Retreg3Q9CQV4 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC15.41■□□□□ 0.06
Retreg3Q9CQV4 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
Retreg3Q9CQV4 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Retreg3Q9CQV4 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Retreg3Q9CQV4 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
Retreg3Q9CQV4 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Retreg3Q9CQV4 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Retreg3Q9CQV4 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Retreg3Q9CQV4 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Retreg3Q9CQV4 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Retreg3Q9CQV4 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Retreg3Q9CQV4 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
Retreg3Q9CQV4 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
Retreg3Q9CQV4 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Retreg3Q9CQV4 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Retreg3Q9CQV4 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Retreg3Q9CQV4 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
Retreg3Q9CQV4 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Retreg3Q9CQV4 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC15.4■□□□□ 0.06
Retreg3Q9CQV4 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Retreg3Q9CQV4 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Retrieved 100 of 76,532 protein–RNA pairs in 36.5 ms