Protein–RNA interactions for Protein: Q9CPR6

Krt88, Keratin 88, mousemouse

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt88Q9CPR6 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Krt88Q9CPR6 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
Krt88Q9CPR6 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Krt88Q9CPR6 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Krt88Q9CPR6 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Krt88Q9CPR6 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Krt88Q9CPR6 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC13.84□□□□□ -0.19
Krt88Q9CPR6 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
Krt88Q9CPR6 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Krt88Q9CPR6 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Krt88Q9CPR6 Asap1-216ENSMUST00000177083 4415 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Krt88Q9CPR6 Tbl1xr1-203ENSMUST00000193734 8237 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Krt88Q9CPR6 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Krt88Q9CPR6 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Krt88Q9CPR6 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Krt88Q9CPR6 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Krt88Q9CPR6 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Krt88Q9CPR6 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Krt88Q9CPR6 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Krt88Q9CPR6 Gm12134-201ENSMUST00000122109 520 ntBASIC13.84□□□□□ -0.19
Krt88Q9CPR6 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Krt88Q9CPR6 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Krt88Q9CPR6 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
Krt88Q9CPR6 Gm27389-201ENSMUST00000183622 195 ntBASIC13.84□□□□□ -0.19
Krt88Q9CPR6 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Krt88Q9CPR6 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Krt88Q9CPR6 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Krt88Q9CPR6 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Krt88Q9CPR6 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Krt88Q9CPR6 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Krt88Q9CPR6 Anxa4-201ENSMUST00000001187 2002 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Krt88Q9CPR6 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Krt88Q9CPR6 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
Krt88Q9CPR6 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Krt88Q9CPR6 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Krt88Q9CPR6 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Krt88Q9CPR6 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Krt88Q9CPR6 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
Krt88Q9CPR6 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Krt88Q9CPR6 Klhl33-204ENSMUST00000227271 5513 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
Krt88Q9CPR6 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Krt88Q9CPR6 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Krt88Q9CPR6 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Krt88Q9CPR6 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Krt88Q9CPR6 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Krt88Q9CPR6 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Krt88Q9CPR6 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Krt88Q9CPR6 Nek7-202ENSMUST00000186017 5258 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Krt88Q9CPR6 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Krt88Q9CPR6 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
Krt88Q9CPR6 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Krt88Q9CPR6 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
Krt88Q9CPR6 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.19
Krt88Q9CPR6 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Krt88Q9CPR6 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Krt88Q9CPR6 Mtss1-201ENSMUST00000080371 4938 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Krt88Q9CPR6 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Krt88Q9CPR6 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Krt88Q9CPR6 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Krt88Q9CPR6 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Krt88Q9CPR6 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC13.83□□□□□ -0.2
Krt88Q9CPR6 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC13.83□□□□□ -0.2
Krt88Q9CPR6 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC13.83□□□□□ -0.2
Krt88Q9CPR6 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC13.83□□□□□ -0.2
Krt88Q9CPR6 AC158538.1-201ENSMUST00000225870 294 ntBASIC13.83□□□□□ -0.2
Krt88Q9CPR6 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Krt88Q9CPR6 Ino80-201ENSMUST00000049920 6354 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
Krt88Q9CPR6 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Krt88Q9CPR6 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC13.83□□□□□ -0.2
Krt88Q9CPR6 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Krt88Q9CPR6 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC13.83□□□□□ -0.2
Krt88Q9CPR6 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Krt88Q9CPR6 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
Krt88Q9CPR6 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Krt88Q9CPR6 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
Krt88Q9CPR6 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Krt88Q9CPR6 Prkcz2-201ENSMUST00000206136 1756 ntBASIC13.83□□□□□ -0.2
Krt88Q9CPR6 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Krt88Q9CPR6 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Krt88Q9CPR6 A430034D21Rik-201ENSMUST00000194339 1802 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Krt88Q9CPR6 Efs-202ENSMUST00000227037 2540 ntBASIC13.83□□□□□ -0.2
Krt88Q9CPR6 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Krt88Q9CPR6 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Krt88Q9CPR6 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Krt88Q9CPR6 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Krt88Q9CPR6 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Krt88Q9CPR6 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Krt88Q9CPR6 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Krt88Q9CPR6 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Krt88Q9CPR6 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Krt88Q9CPR6 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Krt88Q9CPR6 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC13.82□□□□□ -0.2
Krt88Q9CPR6 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC13.82□□□□□ -0.2
Krt88Q9CPR6 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC13.82□□□□□ -0.2
Krt88Q9CPR6 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Krt88Q9CPR6 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Krt88Q9CPR6 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Krt88Q9CPR6 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Krt88Q9CPR6 Heg1-205ENSMUST00000152782 8161 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Krt88Q9CPR6 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 27.6 ms