Protein–RNA interactions for Protein: Q99PV0

Prpf8, Pre-mRNA-processing-splicing factor 8, mousemouse

Known RBP Predictions only

Length 2,335 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf8Q99PV0 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Prpf8Q99PV0 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Prpf8Q99PV0 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Prpf8Q99PV0 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Prpf8Q99PV0 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Prpf8Q99PV0 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC12.55□□□□□ -0.4
Prpf8Q99PV0 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC12.55□□□□□ -0.4
Prpf8Q99PV0 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Prpf8Q99PV0 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Prpf8Q99PV0 Spred2-202ENSMUST00000093299 4449 ntTSL 5 BASIC12.55□□□□□ -0.4
Prpf8Q99PV0 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Prpf8Q99PV0 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Prpf8Q99PV0 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Prpf8Q99PV0 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Prpf8Q99PV0 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Prpf8Q99PV0 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Prpf8Q99PV0 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Prpf8Q99PV0 Apc2-202ENSMUST00000105359 9173 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Prpf8Q99PV0 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Prpf8Q99PV0 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Prpf8Q99PV0 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC12.55□□□□□ -0.4
Prpf8Q99PV0 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Prpf8Q99PV0 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Prpf8Q99PV0 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Prpf8Q99PV0 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC12.55□□□□□ -0.4
Prpf8Q99PV0 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Prpf8Q99PV0 Gm43474-201ENSMUST00000196415 774 ntBASIC12.55□□□□□ -0.4
Prpf8Q99PV0 Gm10747-201ENSMUST00000217799 1014 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Prpf8Q99PV0 Gm5628-201ENSMUST00000222318 1049 ntBASIC12.55□□□□□ -0.4
Prpf8Q99PV0 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
Prpf8Q99PV0 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Prpf8Q99PV0 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Prpf8Q99PV0 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Prpf8Q99PV0 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC12.55□□□□□ -0.4
Prpf8Q99PV0 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Prpf8Q99PV0 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC12.54□□□□□ -0.4
Prpf8Q99PV0 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Prpf8Q99PV0 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Prpf8Q99PV0 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Prpf8Q99PV0 Gm9385-201ENSMUST00000117563 472 ntBASIC12.54□□□□□ -0.4
Prpf8Q99PV0 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC12.54□□□□□ -0.4
Prpf8Q99PV0 Zdhhc23-202ENSMUST00000165648 1278 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Prpf8Q99PV0 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC12.54□□□□□ -0.4
Prpf8Q99PV0 Cd3g-201ENSMUST00000002101 1023 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Prpf8Q99PV0 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC12.54□□□□□ -0.4
Prpf8Q99PV0 AC140375.2-201ENSMUST00000225283 584 ntBASIC12.54□□□□□ -0.4
Prpf8Q99PV0 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Prpf8Q99PV0 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Prpf8Q99PV0 Gpr146-202ENSMUST00000053120 1040 ntBASIC12.54□□□□□ -0.4
Prpf8Q99PV0 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC12.54□□□□□ -0.4
Prpf8Q99PV0 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Prpf8Q99PV0 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Prpf8Q99PV0 AC115863.1-201ENSMUST00000214815 1813 ntBASIC12.54□□□□□ -0.4
Prpf8Q99PV0 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Prpf8Q99PV0 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Prpf8Q99PV0 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC12.54□□□□□ -0.4
Prpf8Q99PV0 Slc39a14-201ENSMUST00000022688 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Prpf8Q99PV0 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Prpf8Q99PV0 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Prpf8Q99PV0 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Prpf8Q99PV0 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Prpf8Q99PV0 Mrto4-202ENSMUST00000102503 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Prpf8Q99PV0 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Prpf8Q99PV0 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Prpf8Q99PV0 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC12.54□□□□□ -0.4
Prpf8Q99PV0 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Prpf8Q99PV0 2410080I02Rik-201ENSMUST00000142712 414 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Prpf8Q99PV0 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC12.54□□□□□ -0.4
Prpf8Q99PV0 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Prpf8Q99PV0 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Prpf8Q99PV0 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC12.54□□□□□ -0.4
Prpf8Q99PV0 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Prpf8Q99PV0 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Prpf8Q99PV0 Zkscan17-201ENSMUST00000013262 4064 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Prpf8Q99PV0 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Prpf8Q99PV0 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Prpf8Q99PV0 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Prpf8Q99PV0 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC12.53□□□□□ -0.4
Prpf8Q99PV0 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Prpf8Q99PV0 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Prpf8Q99PV0 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC12.53□□□□□ -0.4
Prpf8Q99PV0 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Prpf8Q99PV0 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Prpf8Q99PV0 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Prpf8Q99PV0 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Prpf8Q99PV0 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Prpf8Q99PV0 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Prpf8Q99PV0 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC12.53□□□□□ -0.4
Prpf8Q99PV0 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Prpf8Q99PV0 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Prpf8Q99PV0 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Prpf8Q99PV0 AC131187.1-201ENSMUST00000224567 809 ntBASIC12.53□□□□□ -0.4
Prpf8Q99PV0 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Prpf8Q99PV0 Olfr370-201ENSMUST00000058609 1096 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Prpf8Q99PV0 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Prpf8Q99PV0 Kirrel-202ENSMUST00000107618 7278 ntAPPRIS P2 TSL 5 BASIC12.53□□□□□ -0.4
Prpf8Q99PV0 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Prpf8Q99PV0 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Prpf8Q99PV0 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Prpf8Q99PV0 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 22.6 ms