Protein–RNA interactions for Protein: Q99PQ2

Trim11, E3 ubiquitin-protein ligase TRIM11, mousemouse

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim11Q99PQ2 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC17.46■□□□□ 0.39
Trim11Q99PQ2 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trim11Q99PQ2 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Trim11Q99PQ2 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trim11Q99PQ2 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trim11Q99PQ2 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trim11Q99PQ2 Gm43352-201ENSMUST00000196419 3065 ntBASIC17.46■□□□□ 0.39
Trim11Q99PQ2 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Trim11Q99PQ2 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trim11Q99PQ2 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Trim11Q99PQ2 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC17.46■□□□□ 0.39
Trim11Q99PQ2 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC17.46■□□□□ 0.39
Trim11Q99PQ2 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Trim11Q99PQ2 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC17.46■□□□□ 0.39
Trim11Q99PQ2 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC17.46■□□□□ 0.39
Trim11Q99PQ2 Camsap1-201ENSMUST00000091268 7978 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
Trim11Q99PQ2 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trim11Q99PQ2 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Trim11Q99PQ2 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trim11Q99PQ2 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trim11Q99PQ2 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trim11Q99PQ2 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC17.46■□□□□ 0.39
Trim11Q99PQ2 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC17.46■□□□□ 0.39
Trim11Q99PQ2 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC17.46■□□□□ 0.39
Trim11Q99PQ2 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trim11Q99PQ2 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trim11Q99PQ2 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
Trim11Q99PQ2 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trim11Q99PQ2 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trim11Q99PQ2 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trim11Q99PQ2 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
Trim11Q99PQ2 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.38
Trim11Q99PQ2 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
Trim11Q99PQ2 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
Trim11Q99PQ2 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC17.46■□□□□ 0.38
Trim11Q99PQ2 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC17.46■□□□□ 0.38
Trim11Q99PQ2 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
Trim11Q99PQ2 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
Trim11Q99PQ2 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
Trim11Q99PQ2 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trim11Q99PQ2 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trim11Q99PQ2 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Trim11Q99PQ2 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trim11Q99PQ2 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Trim11Q99PQ2 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trim11Q99PQ2 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trim11Q99PQ2 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Trim11Q99PQ2 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
Trim11Q99PQ2 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Trim11Q99PQ2 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trim11Q99PQ2 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Trim11Q99PQ2 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
Trim11Q99PQ2 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
Trim11Q99PQ2 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Trim11Q99PQ2 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Trim11Q99PQ2 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC17.45■□□□□ 0.38
Trim11Q99PQ2 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Trim11Q99PQ2 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC17.45■□□□□ 0.38
Trim11Q99PQ2 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
Trim11Q99PQ2 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trim11Q99PQ2 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trim11Q99PQ2 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Trim11Q99PQ2 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trim11Q99PQ2 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trim11Q99PQ2 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trim11Q99PQ2 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Trim11Q99PQ2 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
Trim11Q99PQ2 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC17.45■□□□□ 0.38
Trim11Q99PQ2 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trim11Q99PQ2 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trim11Q99PQ2 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC17.44■□□□□ 0.38
Trim11Q99PQ2 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Trim11Q99PQ2 Ocrl-201ENSMUST00000001202 5253 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trim11Q99PQ2 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trim11Q99PQ2 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trim11Q99PQ2 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
Trim11Q99PQ2 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC17.44■□□□□ 0.38
Trim11Q99PQ2 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trim11Q99PQ2 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
Trim11Q99PQ2 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC17.44■□□□□ 0.38
Trim11Q99PQ2 AC122024.2-201ENSMUST00000220086 871 ntBASIC17.44■□□□□ 0.38
Trim11Q99PQ2 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trim11Q99PQ2 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC17.44■□□□□ 0.38
Trim11Q99PQ2 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trim11Q99PQ2 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trim11Q99PQ2 St8sia6-201ENSMUST00000003509 7618 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trim11Q99PQ2 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trim11Q99PQ2 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC17.44■□□□□ 0.38
Trim11Q99PQ2 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trim11Q99PQ2 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trim11Q99PQ2 Magi1-202ENSMUST00000089317 7209 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trim11Q99PQ2 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trim11Q99PQ2 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
Trim11Q99PQ2 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
Trim11Q99PQ2 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
Trim11Q99PQ2 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trim11Q99PQ2 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trim11Q99PQ2 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
Trim11Q99PQ2 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
Trim11Q99PQ2 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 44.6 ms