Protein–RNA interactions for Protein: Q99PP7

Trim33, E3 ubiquitin-protein ligase TRIM33, mousemouse

Predictions only

Length 1,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim33Q99PP7 Gm18856-201ENSMUST00000178096 1374 ntBASIC15.21■□□□□ 0.02
Trim33Q99PP7 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Trim33Q99PP7 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Trim33Q99PP7 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Trim33Q99PP7 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Trim33Q99PP7 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.02
Trim33Q99PP7 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Trim33Q99PP7 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Trim33Q99PP7 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Trim33Q99PP7 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Trim33Q99PP7 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Trim33Q99PP7 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC15.2■□□□□ 0.02
Trim33Q99PP7 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC15.2■□□□□ 0.02
Trim33Q99PP7 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trim33Q99PP7 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trim33Q99PP7 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Trim33Q99PP7 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trim33Q99PP7 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Trim33Q99PP7 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC15.2■□□□□ 0.02
Trim33Q99PP7 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trim33Q99PP7 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Trim33Q99PP7 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trim33Q99PP7 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trim33Q99PP7 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trim33Q99PP7 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Trim33Q99PP7 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trim33Q99PP7 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Trim33Q99PP7 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC15.19■□□□□ 0.02
Trim33Q99PP7 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trim33Q99PP7 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trim33Q99PP7 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
Trim33Q99PP7 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC15.19■□□□□ 0.02
Trim33Q99PP7 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
Trim33Q99PP7 Gm7669-201ENSMUST00000210184 1603 ntBASIC15.19■□□□□ 0.02
Trim33Q99PP7 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC15.19■□□□□ 0.02
Trim33Q99PP7 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Trim33Q99PP7 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC15.19■□□□□ 0.02
Trim33Q99PP7 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trim33Q99PP7 AC164629.2-201ENSMUST00000217916 270 ntBASIC15.19■□□□□ 0.02
Trim33Q99PP7 AC154757.1-201ENSMUST00000228289 336 ntBASIC15.19■□□□□ 0.02
Trim33Q99PP7 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trim33Q99PP7 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trim33Q99PP7 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trim33Q99PP7 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trim33Q99PP7 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trim33Q99PP7 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trim33Q99PP7 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trim33Q99PP7 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trim33Q99PP7 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trim33Q99PP7 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trim33Q99PP7 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trim33Q99PP7 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trim33Q99PP7 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trim33Q99PP7 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trim33Q99PP7 Prob1-201ENSMUST00000097619 3021 ntBASIC15.19■□□□□ 0.02
Trim33Q99PP7 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trim33Q99PP7 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trim33Q99PP7 Gm38042-201ENSMUST00000191614 5208 ntBASIC15.19■□□□□ 0.02
Trim33Q99PP7 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trim33Q99PP7 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC15.18■□□□□ 0.02
Trim33Q99PP7 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trim33Q99PP7 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trim33Q99PP7 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trim33Q99PP7 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trim33Q99PP7 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Trim33Q99PP7 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
Trim33Q99PP7 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trim33Q99PP7 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trim33Q99PP7 P4ha1-202ENSMUST00000092512 2387 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Trim33Q99PP7 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trim33Q99PP7 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trim33Q99PP7 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trim33Q99PP7 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC15.18■□□□□ 0.02
Trim33Q99PP7 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trim33Q99PP7 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trim33Q99PP7 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trim33Q99PP7 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC15.18■□□□□ 0.02
Trim33Q99PP7 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trim33Q99PP7 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Trim33Q99PP7 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trim33Q99PP7 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
Trim33Q99PP7 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trim33Q99PP7 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trim33Q99PP7 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trim33Q99PP7 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trim33Q99PP7 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC15.17■□□□□ 0.02
Trim33Q99PP7 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC15.17■□□□□ 0.02
Trim33Q99PP7 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trim33Q99PP7 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trim33Q99PP7 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trim33Q99PP7 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trim33Q99PP7 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Trim33Q99PP7 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trim33Q99PP7 Foxo3-203ENSMUST00000105502 6848 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trim33Q99PP7 Casz1-202ENSMUST00000122222 7926 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Trim33Q99PP7 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
Trim33Q99PP7 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trim33Q99PP7 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Trim33Q99PP7 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trim33Q99PP7 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC15.17■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 38.7 ms