Protein–RNA interactions for Protein: Q99PP6

Trim34a, Tripartite motif-containing protein 34A, mousemouse

Predictions only

Length 485 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim34aQ99PP6 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Trim34aQ99PP6 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Trim34aQ99PP6 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Trim34aQ99PP6 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
Trim34aQ99PP6 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Trim34aQ99PP6 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
Trim34aQ99PP6 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Trim34aQ99PP6 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Trim34aQ99PP6 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Trim34aQ99PP6 Gm7336-201ENSMUST00000107041 1232 ntBASIC18.82■□□□□ 0.6
Trim34aQ99PP6 Tex22-202ENSMUST00000109729 735 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Trim34aQ99PP6 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC18.82■□□□□ 0.6
Trim34aQ99PP6 Gm11543-201ENSMUST00000120758 370 ntBASIC18.82■□□□□ 0.6
Trim34aQ99PP6 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Trim34aQ99PP6 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC18.82■□□□□ 0.6
Trim34aQ99PP6 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Trim34aQ99PP6 Gm16026-204ENSMUST00000162652 683 ntBASIC18.82■□□□□ 0.6
Trim34aQ99PP6 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
Trim34aQ99PP6 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC18.82■□□□□ 0.6
Trim34aQ99PP6 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Trim34aQ99PP6 Gm6594-201ENSMUST00000097278 288 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
Trim34aQ99PP6 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Trim34aQ99PP6 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Trim34aQ99PP6 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Trim34aQ99PP6 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Trim34aQ99PP6 Rogdi-201ENSMUST00000023191 1431 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Trim34aQ99PP6 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Trim34aQ99PP6 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
Trim34aQ99PP6 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Trim34aQ99PP6 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Trim34aQ99PP6 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
Trim34aQ99PP6 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Trim34aQ99PP6 Gm15825-201ENSMUST00000159108 918 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Trim34aQ99PP6 Gm18737-201ENSMUST00000173594 937 ntBASIC18.81■□□□□ 0.6
Trim34aQ99PP6 Gm5779-201ENSMUST00000218467 910 ntBASIC18.81■□□□□ 0.6
Trim34aQ99PP6 AC126408.1-201ENSMUST00000225184 523 ntBASIC18.81■□□□□ 0.6
Trim34aQ99PP6 Klk1-201ENSMUST00000075162 954 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Trim34aQ99PP6 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Trim34aQ99PP6 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
Trim34aQ99PP6 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Trim34aQ99PP6 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Trim34aQ99PP6 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Trim34aQ99PP6 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Trim34aQ99PP6 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Trim34aQ99PP6 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
Trim34aQ99PP6 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
Trim34aQ99PP6 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Trim34aQ99PP6 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Trim34aQ99PP6 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
Trim34aQ99PP6 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Trim34aQ99PP6 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Trim34aQ99PP6 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Trim34aQ99PP6 Myog-201ENSMUST00000027730 1495 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Trim34aQ99PP6 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Trim34aQ99PP6 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
Trim34aQ99PP6 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Trim34aQ99PP6 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Trim34aQ99PP6 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Trim34aQ99PP6 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC18.8■□□□□ 0.6
Trim34aQ99PP6 Gm10044-204ENSMUST00000170177 659 ntTSL 3 BASIC18.8■□□□□ 0.6
Trim34aQ99PP6 Styxl1-207ENSMUST00000177559 1236 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Trim34aQ99PP6 Gm27622-201ENSMUST00000183779 60 ntBASIC18.8■□□□□ 0.6
Trim34aQ99PP6 Gzma-201ENSMUST00000023897 878 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Trim34aQ99PP6 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Trim34aQ99PP6 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
Trim34aQ99PP6 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Trim34aQ99PP6 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC18.8■□□□□ 0.6
Trim34aQ99PP6 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Trim34aQ99PP6 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Trim34aQ99PP6 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
Trim34aQ99PP6 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
Trim34aQ99PP6 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Trim34aQ99PP6 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Trim34aQ99PP6 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Trim34aQ99PP6 Gm11515-201ENSMUST00000150818 701 ntTSL 2 BASIC18.79■□□□□ 0.6
Trim34aQ99PP6 Gm39228-201ENSMUST00000212456 301 ntTSL 5 BASIC18.79■□□□□ 0.6
Trim34aQ99PP6 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Trim34aQ99PP6 Fbxo8-202ENSMUST00000110322 1709 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Trim34aQ99PP6 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Trim34aQ99PP6 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Trim34aQ99PP6 Gm13127-201ENSMUST00000118978 1389 ntBASIC18.79■□□□□ 0.6
Trim34aQ99PP6 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Trim34aQ99PP6 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Trim34aQ99PP6 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Trim34aQ99PP6 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Trim34aQ99PP6 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC18.78■□□□□ 0.6
Trim34aQ99PP6 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Trim34aQ99PP6 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Trim34aQ99PP6 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Trim34aQ99PP6 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Trim34aQ99PP6 Gm2810-201ENSMUST00000118681 990 ntBASIC18.78■□□□□ 0.6
Trim34aQ99PP6 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC18.78■□□□□ 0.6
Trim34aQ99PP6 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC18.78■□□□□ 0.6
Trim34aQ99PP6 Gpx4-207ENSMUST00000183037 735 ntTSL 2 BASIC18.78■□□□□ 0.6
Trim34aQ99PP6 Gm28277-201ENSMUST00000187450 885 ntTSL 3 BASIC18.78■□□□□ 0.6
Trim34aQ99PP6 Gm8239-201ENSMUST00000204094 444 ntTSL 2 BASIC18.78■□□□□ 0.6
Trim34aQ99PP6 Pomc-201ENSMUST00000020990 1031 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Trim34aQ99PP6 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Trim34aQ99PP6 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC18.78■□□□□ 0.6
Trim34aQ99PP6 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 41.3 ms