Protein–RNA interactions for Protein: Q99M85

Scrt1, Transcriptional repressor scratch 1, mousemouse

Predictions only

Length 348 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scrt1Q99M85 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
Scrt1Q99M85 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Scrt1Q99M85 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
Scrt1Q99M85 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Scrt1Q99M85 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Scrt1Q99M85 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
Scrt1Q99M85 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Scrt1Q99M85 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Scrt1Q99M85 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Scrt1Q99M85 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
Scrt1Q99M85 Rhox2d-201ENSMUST00000115179 685 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
Scrt1Q99M85 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
Scrt1Q99M85 Gm26854-201ENSMUST00000180418 705 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Scrt1Q99M85 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Scrt1Q99M85 4930448I06Rik-201ENSMUST00000194002 546 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Scrt1Q99M85 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Scrt1Q99M85 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Scrt1Q99M85 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Scrt1Q99M85 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Scrt1Q99M85 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
Scrt1Q99M85 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Scrt1Q99M85 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Scrt1Q99M85 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Scrt1Q99M85 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Scrt1Q99M85 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC13.42□□□□□ -0.26
Scrt1Q99M85 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
Scrt1Q99M85 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Scrt1Q99M85 Gm13332-201ENSMUST00000120451 1398 ntBASIC13.42□□□□□ -0.26
Scrt1Q99M85 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Scrt1Q99M85 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
Scrt1Q99M85 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Scrt1Q99M85 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Scrt1Q99M85 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Scrt1Q99M85 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Scrt1Q99M85 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Scrt1Q99M85 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Scrt1Q99M85 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Scrt1Q99M85 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Scrt1Q99M85 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Scrt1Q99M85 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
Scrt1Q99M85 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Scrt1Q99M85 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Scrt1Q99M85 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Scrt1Q99M85 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Scrt1Q99M85 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC13.41□□□□□ -0.26
Scrt1Q99M85 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Scrt1Q99M85 Prob1-201ENSMUST00000097619 3021 ntBASIC13.41□□□□□ -0.26
Scrt1Q99M85 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Scrt1Q99M85 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Scrt1Q99M85 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC13.41□□□□□ -0.26
Scrt1Q99M85 Gm12892-201ENSMUST00000117367 1146 ntBASIC13.41□□□□□ -0.26
Scrt1Q99M85 Gm15825-201ENSMUST00000159108 918 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Scrt1Q99M85 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Scrt1Q99M85 Cebpzos-202ENSMUST00000180077 602 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Scrt1Q99M85 Gm5312-201ENSMUST00000203728 547 ntBASIC13.41□□□□□ -0.26
Scrt1Q99M85 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC13.41□□□□□ -0.26
Scrt1Q99M85 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC13.41□□□□□ -0.26
Scrt1Q99M85 Lce1c-201ENSMUST00000047055 724 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Scrt1Q99M85 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
Scrt1Q99M85 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
Scrt1Q99M85 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Scrt1Q99M85 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Scrt1Q99M85 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Scrt1Q99M85 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC13.41□□□□□ -0.26
Scrt1Q99M85 AC157650.3-201ENSMUST00000225058 1476 ntBASIC13.41□□□□□ -0.26
Scrt1Q99M85 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Scrt1Q99M85 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Scrt1Q99M85 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Scrt1Q99M85 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Scrt1Q99M85 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Scrt1Q99M85 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC13.4□□□□□ -0.26
Scrt1Q99M85 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC13.4□□□□□ -0.26
Scrt1Q99M85 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Scrt1Q99M85 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Scrt1Q99M85 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC13.4□□□□□ -0.26
Scrt1Q99M85 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Scrt1Q99M85 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
Scrt1Q99M85 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Scrt1Q99M85 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC13.4□□□□□ -0.26
Scrt1Q99M85 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Scrt1Q99M85 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
Scrt1Q99M85 Esd-207ENSMUST00000176957 1117 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Scrt1Q99M85 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC13.4□□□□□ -0.26
Scrt1Q99M85 Gm5745-201ENSMUST00000183748 313 ntBASIC13.4□□□□□ -0.26
Scrt1Q99M85 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC13.4□□□□□ -0.26
Scrt1Q99M85 Gm45747-201ENSMUST00000212203 999 ntBASIC13.4□□□□□ -0.26
Scrt1Q99M85 Cplx3-202ENSMUST00000215487 594 ntTSL 3 BASIC13.4□□□□□ -0.26
Scrt1Q99M85 Gm5626-201ENSMUST00000222151 1058 ntBASIC13.4□□□□□ -0.26
Scrt1Q99M85 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Scrt1Q99M85 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Scrt1Q99M85 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Scrt1Q99M85 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Scrt1Q99M85 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Scrt1Q99M85 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Scrt1Q99M85 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC13.4□□□□□ -0.26
Scrt1Q99M85 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Scrt1Q99M85 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Scrt1Q99M85 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
Scrt1Q99M85 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.27
Scrt1Q99M85 Dusp13-202ENSMUST00000119866 1342 ntTSL 5 BASIC13.39□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 24.3 ms