Protein–RNA interactions for Protein: Q920F6

Smc1b, Structural maintenance of chromosomes protein 1B, mousemouse

Predictions only

Length 1,248 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1bQ920F6 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Smc1bQ920F6 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
Smc1bQ920F6 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Smc1bQ920F6 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Smc1bQ920F6 Gm2308-201ENSMUST00000166539 1004 ntBASIC17.65■□□□□ 0.42
Smc1bQ920F6 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Smc1bQ920F6 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC17.65■□□□□ 0.42
Smc1bQ920F6 Gm27494-201ENSMUST00000184735 189 ntBASIC17.65■□□□□ 0.42
Smc1bQ920F6 Gm37153-201ENSMUST00000193637 231 ntBASIC17.65■□□□□ 0.42
Smc1bQ920F6 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Smc1bQ920F6 AC154572.2-201ENSMUST00000225105 997 ntBASIC17.65■□□□□ 0.42
Smc1bQ920F6 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Smc1bQ920F6 Gm9949-201ENSMUST00000067743 962 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Smc1bQ920F6 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
Smc1bQ920F6 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Smc1bQ920F6 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Smc1bQ920F6 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC17.65■□□□□ 0.42
Smc1bQ920F6 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Smc1bQ920F6 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Smc1bQ920F6 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Smc1bQ920F6 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Smc1bQ920F6 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Smc1bQ920F6 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
Smc1bQ920F6 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
Smc1bQ920F6 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC17.64■□□□□ 0.42
Smc1bQ920F6 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Smc1bQ920F6 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Smc1bQ920F6 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Smc1bQ920F6 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Smc1bQ920F6 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Smc1bQ920F6 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Smc1bQ920F6 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Smc1bQ920F6 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Smc1bQ920F6 Ube2v2-202ENSMUST00000115776 1236 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Smc1bQ920F6 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC17.64■□□□□ 0.41
Smc1bQ920F6 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC17.64■□□□□ 0.41
Smc1bQ920F6 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC17.64■□□□□ 0.41
Smc1bQ920F6 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Smc1bQ920F6 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Smc1bQ920F6 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
Smc1bQ920F6 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Smc1bQ920F6 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Smc1bQ920F6 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Smc1bQ920F6 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Smc1bQ920F6 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Smc1bQ920F6 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
Smc1bQ920F6 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Smc1bQ920F6 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Smc1bQ920F6 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Smc1bQ920F6 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Smc1bQ920F6 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Smc1bQ920F6 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Smc1bQ920F6 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Smc1bQ920F6 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC17.64■□□□□ 0.41
Smc1bQ920F6 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC17.64■□□□□ 0.41
Smc1bQ920F6 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Smc1bQ920F6 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC17.63■□□□□ 0.41
Smc1bQ920F6 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Smc1bQ920F6 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Smc1bQ920F6 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Smc1bQ920F6 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Smc1bQ920F6 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Smc1bQ920F6 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Smc1bQ920F6 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Smc1bQ920F6 Tmsb10-203ENSMUST00000114050 570 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Smc1bQ920F6 Gm36967-201ENSMUST00000193814 266 ntBASIC17.63■□□□□ 0.41
Smc1bQ920F6 Gm44492-201ENSMUST00000197012 141 ntBASIC17.63■□□□□ 0.41
Smc1bQ920F6 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Smc1bQ920F6 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Smc1bQ920F6 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
Smc1bQ920F6 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Smc1bQ920F6 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Smc1bQ920F6 Gm44616-201ENSMUST00000206417 1732 ntBASIC17.63■□□□□ 0.41
Smc1bQ920F6 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
Smc1bQ920F6 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Smc1bQ920F6 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Smc1bQ920F6 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Smc1bQ920F6 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Smc1bQ920F6 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Smc1bQ920F6 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Smc1bQ920F6 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Smc1bQ920F6 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Smc1bQ920F6 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Smc1bQ920F6 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Smc1bQ920F6 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
Smc1bQ920F6 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Smc1bQ920F6 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
Smc1bQ920F6 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Smc1bQ920F6 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Smc1bQ920F6 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Smc1bQ920F6 Arhgap27os1-201ENSMUST00000130556 923 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Smc1bQ920F6 Gm14268-201ENSMUST00000132465 682 ntTSL 3 BASIC17.62■□□□□ 0.41
Smc1bQ920F6 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC17.62■□□□□ 0.41
Smc1bQ920F6 Gm4899-201ENSMUST00000178708 719 ntBASIC17.62■□□□□ 0.41
Smc1bQ920F6 Cebpzos-202ENSMUST00000180077 602 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Smc1bQ920F6 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC17.62■□□□□ 0.41
Smc1bQ920F6 Ftl1-ps1-202ENSMUST00000222435 938 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
Smc1bQ920F6 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Smc1bQ920F6 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Smc1bQ920F6 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 31.4 ms