Protein–RNA interactions for Protein: Q91XZ9

Pcdhb20, Protocadherin beta 20, mousemouse

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb20Q91XZ9 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Pcdhb20Q91XZ9 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
Pcdhb20Q91XZ9 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Pcdhb20Q91XZ9 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Pcdhb20Q91XZ9 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Pcdhb20Q91XZ9 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Pcdhb20Q91XZ9 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
Pcdhb20Q91XZ9 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC14.89□□□□□ -0.03
Pcdhb20Q91XZ9 Pgap2-204ENSMUST00000120879 2141 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Pcdhb20Q91XZ9 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Pcdhb20Q91XZ9 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Pcdhb20Q91XZ9 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Pcdhb20Q91XZ9 Gm7669-201ENSMUST00000210184 1603 ntBASIC14.89□□□□□ -0.03
Pcdhb20Q91XZ9 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Pcdhb20Q91XZ9 CT010478.1-201ENSMUST00000220747 2787 ntBASIC14.89□□□□□ -0.03
Pcdhb20Q91XZ9 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Pcdhb20Q91XZ9 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC14.89□□□□□ -0.03
Pcdhb20Q91XZ9 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
Pcdhb20Q91XZ9 Gm2030-201ENSMUST00000119590 1129 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
Pcdhb20Q91XZ9 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC14.89□□□□□ -0.03
Pcdhb20Q91XZ9 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC14.89□□□□□ -0.03
Pcdhb20Q91XZ9 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Pcdhb20Q91XZ9 Gm29011-201ENSMUST00000191059 712 ntBASIC14.89□□□□□ -0.03
Pcdhb20Q91XZ9 Gm38280-201ENSMUST00000192610 158 ntBASIC14.89□□□□□ -0.03
Pcdhb20Q91XZ9 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC14.89□□□□□ -0.03
Pcdhb20Q91XZ9 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Pcdhb20Q91XZ9 AC132433.1-201ENSMUST00000221553 1101 ntBASIC14.89□□□□□ -0.03
Pcdhb20Q91XZ9 AC154222.1-201ENSMUST00000223882 475 ntBASIC14.89□□□□□ -0.03
Pcdhb20Q91XZ9 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
Pcdhb20Q91XZ9 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Pcdhb20Q91XZ9 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Pcdhb20Q91XZ9 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
Pcdhb20Q91XZ9 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Pcdhb20Q91XZ9 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC14.89□□□□□ -0.03
Pcdhb20Q91XZ9 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC14.89□□□□□ -0.03
Pcdhb20Q91XZ9 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Pcdhb20Q91XZ9 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Pcdhb20Q91XZ9 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC14.89□□□□□ -0.03
Pcdhb20Q91XZ9 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
Pcdhb20Q91XZ9 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Pcdhb20Q91XZ9 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Pcdhb20Q91XZ9 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Pcdhb20Q91XZ9 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC14.89□□□□□ -0.03
Pcdhb20Q91XZ9 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
Pcdhb20Q91XZ9 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Pcdhb20Q91XZ9 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Pcdhb20Q91XZ9 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Pcdhb20Q91XZ9 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Pcdhb20Q91XZ9 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC14.88□□□□□ -0.03
Pcdhb20Q91XZ9 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC14.88□□□□□ -0.03
Pcdhb20Q91XZ9 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Pcdhb20Q91XZ9 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Pcdhb20Q91XZ9 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Pcdhb20Q91XZ9 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Pcdhb20Q91XZ9 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Pcdhb20Q91XZ9 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Pcdhb20Q91XZ9 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Pcdhb20Q91XZ9 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Pcdhb20Q91XZ9 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Pcdhb20Q91XZ9 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
Pcdhb20Q91XZ9 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Pcdhb20Q91XZ9 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC14.88□□□□□ -0.03
Pcdhb20Q91XZ9 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Pcdhb20Q91XZ9 Gm28041-201ENSMUST00000166080 779 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Pcdhb20Q91XZ9 Gm18489-201ENSMUST00000172565 551 ntBASIC14.88□□□□□ -0.03
Pcdhb20Q91XZ9 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC14.88□□□□□ -0.03
Pcdhb20Q91XZ9 Gm7286-201ENSMUST00000182691 1007 ntBASIC14.88□□□□□ -0.03
Pcdhb20Q91XZ9 Gm28180-201ENSMUST00000189608 722 ntBASIC14.88□□□□□ -0.03
Pcdhb20Q91XZ9 Gm18660-201ENSMUST00000199542 629 ntBASIC14.88□□□□□ -0.03
Pcdhb20Q91XZ9 AC084391.1-201ENSMUST00000200651 141 ntBASIC14.88□□□□□ -0.03
Pcdhb20Q91XZ9 Gm43935-201ENSMUST00000203569 1050 ntBASIC14.88□□□□□ -0.03
Pcdhb20Q91XZ9 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Pcdhb20Q91XZ9 Gm7787-201ENSMUST00000216858 688 ntBASIC14.88□□□□□ -0.03
Pcdhb20Q91XZ9 AC153526.5-201ENSMUST00000218661 2147 ntBASIC14.88□□□□□ -0.03
Pcdhb20Q91XZ9 CT010480.1-201ENSMUST00000223612 363 ntBASIC14.88□□□□□ -0.03
Pcdhb20Q91XZ9 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
Pcdhb20Q91XZ9 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC14.88□□□□□ -0.03
Pcdhb20Q91XZ9 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Pcdhb20Q91XZ9 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Pcdhb20Q91XZ9 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC14.88□□□□□ -0.03
Pcdhb20Q91XZ9 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Pcdhb20Q91XZ9 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Pcdhb20Q91XZ9 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC14.88□□□□□ -0.03
Pcdhb20Q91XZ9 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Pcdhb20Q91XZ9 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
Pcdhb20Q91XZ9 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Pcdhb20Q91XZ9 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Pcdhb20Q91XZ9 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Pcdhb20Q91XZ9 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Pcdhb20Q91XZ9 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Pcdhb20Q91XZ9 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
Pcdhb20Q91XZ9 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Pcdhb20Q91XZ9 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC14.88□□□□□ -0.03
Pcdhb20Q91XZ9 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC14.88□□□□□ -0.03
Pcdhb20Q91XZ9 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC14.88□□□□□ -0.03
Pcdhb20Q91XZ9 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Pcdhb20Q91XZ9 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
Pcdhb20Q91XZ9 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC14.88□□□□□ -0.03
Pcdhb20Q91XZ9 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Pcdhb20Q91XZ9 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 24.9 ms