Protein–RNA interactions for Protein: Q91XZ4

Pcdhb6, Protocadherin beta-6, mousemouse

Predictions only

Length 772 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb6Q91XZ4 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Pcdhb6Q91XZ4 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC15.72■□□□□ 0.11
Pcdhb6Q91XZ4 AC161829.1-201ENSMUST00000220298 281 ntBASIC15.72■□□□□ 0.11
Pcdhb6Q91XZ4 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Pcdhb6Q91XZ4 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
Pcdhb6Q91XZ4 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC15.72■□□□□ 0.11
Pcdhb6Q91XZ4 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Pcdhb6Q91XZ4 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC15.72■□□□□ 0.11
Pcdhb6Q91XZ4 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Pcdhb6Q91XZ4 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Pcdhb6Q91XZ4 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
Pcdhb6Q91XZ4 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Pcdhb6Q91XZ4 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
Pcdhb6Q91XZ4 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Pcdhb6Q91XZ4 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Pcdhb6Q91XZ4 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Pcdhb6Q91XZ4 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
Pcdhb6Q91XZ4 Irs2-201ENSMUST00000040514 6323 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Pcdhb6Q91XZ4 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
Pcdhb6Q91XZ4 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Pcdhb6Q91XZ4 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Pcdhb6Q91XZ4 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Pcdhb6Q91XZ4 Gm8242-201ENSMUST00000193029 1420 ntBASIC15.71■□□□□ 0.11
Pcdhb6Q91XZ4 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC15.71■□□□□ 0.11
Pcdhb6Q91XZ4 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Pcdhb6Q91XZ4 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
Pcdhb6Q91XZ4 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Pcdhb6Q91XZ4 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Pcdhb6Q91XZ4 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Pcdhb6Q91XZ4 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC15.71■□□□□ 0.11
Pcdhb6Q91XZ4 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Pcdhb6Q91XZ4 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Pcdhb6Q91XZ4 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
Pcdhb6Q91XZ4 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Pcdhb6Q91XZ4 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
Pcdhb6Q91XZ4 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC15.71■□□□□ 0.11
Pcdhb6Q91XZ4 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
Pcdhb6Q91XZ4 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Pcdhb6Q91XZ4 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Pcdhb6Q91XZ4 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Pcdhb6Q91XZ4 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Pcdhb6Q91XZ4 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
Pcdhb6Q91XZ4 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
Pcdhb6Q91XZ4 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Pcdhb6Q91XZ4 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Pcdhb6Q91XZ4 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Pcdhb6Q91XZ4 Gm43352-201ENSMUST00000196419 3065 ntBASIC15.71■□□□□ 0.1
Pcdhb6Q91XZ4 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Pcdhb6Q91XZ4 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Pcdhb6Q91XZ4 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC15.71■□□□□ 0.1
Pcdhb6Q91XZ4 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
Pcdhb6Q91XZ4 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.1
Pcdhb6Q91XZ4 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Pcdhb6Q91XZ4 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Pcdhb6Q91XZ4 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Pcdhb6Q91XZ4 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Pcdhb6Q91XZ4 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Pcdhb6Q91XZ4 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Pcdhb6Q91XZ4 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Pcdhb6Q91XZ4 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Pcdhb6Q91XZ4 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
Pcdhb6Q91XZ4 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
Pcdhb6Q91XZ4 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
Pcdhb6Q91XZ4 Gm13884-201ENSMUST00000118103 829 ntBASIC15.7■□□□□ 0.1
Pcdhb6Q91XZ4 Gm15173-201ENSMUST00000122049 433 ntBASIC15.7■□□□□ 0.1
Pcdhb6Q91XZ4 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Pcdhb6Q91XZ4 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC15.7■□□□□ 0.1
Pcdhb6Q91XZ4 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC15.7■□□□□ 0.1
Pcdhb6Q91XZ4 Gm10060-201ENSMUST00000212002 111 ntBASIC15.7■□□□□ 0.1
Pcdhb6Q91XZ4 AC151836.1-202ENSMUST00000226259 753 ntBASIC15.7■□□□□ 0.1
Pcdhb6Q91XZ4 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Pcdhb6Q91XZ4 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Pcdhb6Q91XZ4 AC154412.1-201ENSMUST00000226540 2786 ntBASIC15.7■□□□□ 0.1
Pcdhb6Q91XZ4 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Pcdhb6Q91XZ4 Celf4-206ENSMUST00000224553 1729 ntBASIC15.7■□□□□ 0.1
Pcdhb6Q91XZ4 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
Pcdhb6Q91XZ4 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
Pcdhb6Q91XZ4 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Pcdhb6Q91XZ4 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Pcdhb6Q91XZ4 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Pcdhb6Q91XZ4 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Pcdhb6Q91XZ4 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC15.7■□□□□ 0.1
Pcdhb6Q91XZ4 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Pcdhb6Q91XZ4 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Pcdhb6Q91XZ4 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Pcdhb6Q91XZ4 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Pcdhb6Q91XZ4 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Pcdhb6Q91XZ4 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Pcdhb6Q91XZ4 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC15.69■□□□□ 0.1
Pcdhb6Q91XZ4 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Pcdhb6Q91XZ4 Gm5184-201ENSMUST00000220417 1702 ntBASIC15.69■□□□□ 0.1
Pcdhb6Q91XZ4 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Pcdhb6Q91XZ4 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Pcdhb6Q91XZ4 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC15.69■□□□□ 0.1
Pcdhb6Q91XZ4 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Pcdhb6Q91XZ4 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Pcdhb6Q91XZ4 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Pcdhb6Q91XZ4 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Pcdhb6Q91XZ4 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Pcdhb6Q91XZ4 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC15.69■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 27.1 ms