Protein–RNA interactions for Protein: Q91XY8

Pcdhga11, Protocadherin gamma A11, mousemouse

Predictions only

Length 933 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga11Q91XY8 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Pcdhga11Q91XY8 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pcdhga11Q91XY8 Gm12497-201ENSMUST00000138778 237 ntBASIC14.82□□□□□ -0.04
Pcdhga11Q91XY8 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pcdhga11Q91XY8 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pcdhga11Q91XY8 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pcdhga11Q91XY8 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pcdhga11Q91XY8 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pcdhga11Q91XY8 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC14.82□□□□□ -0.04
Pcdhga11Q91XY8 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pcdhga11Q91XY8 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Pcdhga11Q91XY8 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pcdhga11Q91XY8 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Pcdhga11Q91XY8 Gm13337-201ENSMUST00000119183 1594 ntBASIC14.81□□□□□ -0.04
Pcdhga11Q91XY8 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Pcdhga11Q91XY8 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC14.81□□□□□ -0.04
Pcdhga11Q91XY8 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Pcdhga11Q91XY8 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Pcdhga11Q91XY8 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Pcdhga11Q91XY8 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Pcdhga11Q91XY8 1810008I18Rik-201ENSMUST00000185464 2419 ntBASIC14.81□□□□□ -0.04
Pcdhga11Q91XY8 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Pcdhga11Q91XY8 Gm42901-201ENSMUST00000197735 3171 ntBASIC14.81□□□□□ -0.04
Pcdhga11Q91XY8 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Pcdhga11Q91XY8 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Pcdhga11Q91XY8 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Pcdhga11Q91XY8 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC14.81□□□□□ -0.04
Pcdhga11Q91XY8 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC14.81□□□□□ -0.04
Pcdhga11Q91XY8 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Pcdhga11Q91XY8 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Pcdhga11Q91XY8 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Pcdhga11Q91XY8 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC14.81□□□□□ -0.04
Pcdhga11Q91XY8 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Pcdhga11Q91XY8 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Pcdhga11Q91XY8 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
Pcdhga11Q91XY8 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Pcdhga11Q91XY8 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Pcdhga11Q91XY8 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Pcdhga11Q91XY8 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Pcdhga11Q91XY8 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pcdhga11Q91XY8 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC14.8□□□□□ -0.04
Pcdhga11Q91XY8 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pcdhga11Q91XY8 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pcdhga11Q91XY8 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pcdhga11Q91XY8 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pcdhga11Q91XY8 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Pcdhga11Q91XY8 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pcdhga11Q91XY8 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pcdhga11Q91XY8 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Pcdhga11Q91XY8 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC14.8□□□□□ -0.04
Pcdhga11Q91XY8 Gm24589-201ENSMUST00000116692 94 ntBASIC14.8□□□□□ -0.04
Pcdhga11Q91XY8 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC14.8□□□□□ -0.04
Pcdhga11Q91XY8 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC14.8□□□□□ -0.04
Pcdhga11Q91XY8 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC14.8□□□□□ -0.04
Pcdhga11Q91XY8 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC14.8□□□□□ -0.04
Pcdhga11Q91XY8 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pcdhga11Q91XY8 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pcdhga11Q91XY8 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pcdhga11Q91XY8 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pcdhga11Q91XY8 Eef1e1-201ENSMUST00000001757 2553 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pcdhga11Q91XY8 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pcdhga11Q91XY8 Car10-203ENSMUST00000107858 2742 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Pcdhga11Q91XY8 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC14.8□□□□□ -0.04
Pcdhga11Q91XY8 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC14.8□□□□□ -0.04
Pcdhga11Q91XY8 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Pcdhga11Q91XY8 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pcdhga11Q91XY8 Klk7-201ENSMUST00000032955 1895 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pcdhga11Q91XY8 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pcdhga11Q91XY8 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pcdhga11Q91XY8 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pcdhga11Q91XY8 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pcdhga11Q91XY8 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pcdhga11Q91XY8 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Pcdhga11Q91XY8 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
Pcdhga11Q91XY8 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Pcdhga11Q91XY8 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Pcdhga11Q91XY8 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Pcdhga11Q91XY8 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Pcdhga11Q91XY8 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC14.79□□□□□ -0.04
Pcdhga11Q91XY8 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC14.79□□□□□ -0.04
Pcdhga11Q91XY8 Gm8344-201ENSMUST00000119813 856 ntBASIC14.79□□□□□ -0.04
Pcdhga11Q91XY8 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Pcdhga11Q91XY8 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Pcdhga11Q91XY8 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC14.79□□□□□ -0.04
Pcdhga11Q91XY8 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Pcdhga11Q91XY8 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
Pcdhga11Q91XY8 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Pcdhga11Q91XY8 AC124569.2-201ENSMUST00000225998 818 ntBASIC14.79□□□□□ -0.04
Pcdhga11Q91XY8 AC117588.1-201ENSMUST00000228510 999 ntBASIC14.79□□□□□ -0.04
Pcdhga11Q91XY8 Maged2-201ENSMUST00000026302 2207 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Pcdhga11Q91XY8 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Pcdhga11Q91XY8 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Pcdhga11Q91XY8 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Pcdhga11Q91XY8 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Pcdhga11Q91XY8 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Pcdhga11Q91XY8 Zfp865-201ENSMUST00000076251 7503 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Pcdhga11Q91XY8 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Pcdhga11Q91XY8 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
Pcdhga11Q91XY8 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Pcdhga11Q91XY8 1600014C10Rik-205ENSMUST00000178876 3283 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 39.5 ms