Protein–RNA interactions for Protein: Q91XX9

Pcdhga9, Protocadherin gamma A9, mousemouse

Predictions only

Length 932 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga9Q91XX9 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdhga9Q91XX9 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
Pcdhga9Q91XX9 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdhga9Q91XX9 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdhga9Q91XX9 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC15.15■□□□□ 0.02
Pcdhga9Q91XX9 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdhga9Q91XX9 Gm15467-201ENSMUST00000120582 445 ntBASIC15.15■□□□□ 0.02
Pcdhga9Q91XX9 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC15.15■□□□□ 0.02
Pcdhga9Q91XX9 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC15.15■□□□□ 0.02
Pcdhga9Q91XX9 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC15.15■□□□□ 0.02
Pcdhga9Q91XX9 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdhga9Q91XX9 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Pcdhga9Q91XX9 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdhga9Q91XX9 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdhga9Q91XX9 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdhga9Q91XX9 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Pcdhga9Q91XX9 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC15.15■□□□□ 0.02
Pcdhga9Q91XX9 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pcdhga9Q91XX9 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pcdhga9Q91XX9 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
Pcdhga9Q91XX9 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC15.14■□□□□ 0.01
Pcdhga9Q91XX9 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC15.14■□□□□ 0.01
Pcdhga9Q91XX9 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pcdhga9Q91XX9 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC15.14■□□□□ 0.01
Pcdhga9Q91XX9 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pcdhga9Q91XX9 Kif21a-201ENSMUST00000067205 6307 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pcdhga9Q91XX9 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Pcdhga9Q91XX9 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pcdhga9Q91XX9 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC15.14■□□□□ 0.01
Pcdhga9Q91XX9 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pcdhga9Q91XX9 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC15.14■□□□□ 0.01
Pcdhga9Q91XX9 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Pcdhga9Q91XX9 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC15.14■□□□□ 0.01
Pcdhga9Q91XX9 Gm6184-201ENSMUST00000120403 1261 ntBASIC15.14■□□□□ 0.01
Pcdhga9Q91XX9 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC15.14■□□□□ 0.01
Pcdhga9Q91XX9 Gm7556-201ENSMUST00000201178 1084 ntBASIC15.14■□□□□ 0.01
Pcdhga9Q91XX9 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Pcdhga9Q91XX9 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC15.14■□□□□ 0.01
Pcdhga9Q91XX9 AC154222.1-201ENSMUST00000223882 475 ntBASIC15.14■□□□□ 0.01
Pcdhga9Q91XX9 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pcdhga9Q91XX9 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pcdhga9Q91XX9 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pcdhga9Q91XX9 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pcdhga9Q91XX9 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Pcdhga9Q91XX9 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pcdhga9Q91XX9 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pcdhga9Q91XX9 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pcdhga9Q91XX9 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pcdhga9Q91XX9 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pcdhga9Q91XX9 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Pcdhga9Q91XX9 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Pcdhga9Q91XX9 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pcdhga9Q91XX9 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pcdhga9Q91XX9 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC15.13■□□□□ 0.01
Pcdhga9Q91XX9 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC15.13■□□□□ 0.01
Pcdhga9Q91XX9 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pcdhga9Q91XX9 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pcdhga9Q91XX9 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pcdhga9Q91XX9 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Pcdhga9Q91XX9 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pcdhga9Q91XX9 Gm11185-201ENSMUST00000117732 1007 ntBASIC15.13■□□□□ 0.01
Pcdhga9Q91XX9 Gm13036-201ENSMUST00000117799 748 ntBASIC15.13■□□□□ 0.01
Pcdhga9Q91XX9 Gm12260-201ENSMUST00000122447 411 ntBASIC15.13■□□□□ 0.01
Pcdhga9Q91XX9 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Pcdhga9Q91XX9 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pcdhga9Q91XX9 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC15.13■□□□□ 0.01
Pcdhga9Q91XX9 Gm8318-201ENSMUST00000182954 872 ntBASIC15.13■□□□□ 0.01
Pcdhga9Q91XX9 Gm37153-201ENSMUST00000193637 231 ntBASIC15.13■□□□□ 0.01
Pcdhga9Q91XX9 Gm43935-201ENSMUST00000203569 1050 ntBASIC15.13■□□□□ 0.01
Pcdhga9Q91XX9 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pcdhga9Q91XX9 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pcdhga9Q91XX9 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC15.13■□□□□ 0.01
Pcdhga9Q91XX9 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pcdhga9Q91XX9 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pcdhga9Q91XX9 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pcdhga9Q91XX9 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pcdhga9Q91XX9 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
Pcdhga9Q91XX9 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Pcdhga9Q91XX9 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Pcdhga9Q91XX9 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pcdhga9Q91XX9 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC15.13■□□□□ 0.01
Pcdhga9Q91XX9 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
Pcdhga9Q91XX9 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pcdhga9Q91XX9 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Pcdhga9Q91XX9 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Pcdhga9Q91XX9 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Pcdhga9Q91XX9 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Pcdhga9Q91XX9 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Pcdhga9Q91XX9 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC15.12■□□□□ 0.01
Pcdhga9Q91XX9 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Pcdhga9Q91XX9 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Pcdhga9Q91XX9 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Pcdhga9Q91XX9 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Pcdhga9Q91XX9 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Pcdhga9Q91XX9 Gm14140-201ENSMUST00000119999 995 ntBASIC15.12■□□□□ 0.01
Pcdhga9Q91XX9 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC15.12■□□□□ 0.01
Pcdhga9Q91XX9 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC15.12■□□□□ 0.01
Pcdhga9Q91XX9 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC15.12■□□□□ 0.01
Pcdhga9Q91XX9 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC15.12■□□□□ 0.01
Pcdhga9Q91XX9 Gm25925-201ENSMUST00000158314 306 ntBASIC15.12■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 45.6 ms