Protein–RNA interactions for Protein: Q91VN6

Ddx41, Probable ATP-dependent RNA helicase DDX41, mousemouse

Known RBP Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx41Q91VN6 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Ddx41Q91VN6 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC17.58■□□□□ 0.4
Ddx41Q91VN6 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Ddx41Q91VN6 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ddx41Q91VN6 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Ddx41Q91VN6 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ddx41Q91VN6 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ddx41Q91VN6 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC17.57■□□□□ 0.4
Ddx41Q91VN6 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ddx41Q91VN6 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ddx41Q91VN6 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ddx41Q91VN6 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Ddx41Q91VN6 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ddx41Q91VN6 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ddx41Q91VN6 Gm8344-201ENSMUST00000119813 856 ntBASIC17.57■□□□□ 0.4
Ddx41Q91VN6 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC17.57■□□□□ 0.4
Ddx41Q91VN6 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ddx41Q91VN6 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC17.57■□□□□ 0.4
Ddx41Q91VN6 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Ddx41Q91VN6 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ddx41Q91VN6 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ddx41Q91VN6 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ddx41Q91VN6 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Ddx41Q91VN6 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC17.57■□□□□ 0.4
Ddx41Q91VN6 Zkscan3-208ENSMUST00000224820 5398 ntBASIC17.57■□□□□ 0.4
Ddx41Q91VN6 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ddx41Q91VN6 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC17.57■□□□□ 0.4
Ddx41Q91VN6 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ddx41Q91VN6 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Ddx41Q91VN6 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ddx41Q91VN6 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Ddx41Q91VN6 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC17.56■□□□□ 0.4
Ddx41Q91VN6 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ddx41Q91VN6 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ddx41Q91VN6 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC17.56■□□□□ 0.4
Ddx41Q91VN6 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC17.56■□□□□ 0.4
Ddx41Q91VN6 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ddx41Q91VN6 AC093926.2-201ENSMUST00000214468 1228 ntBASIC17.56■□□□□ 0.4
Ddx41Q91VN6 CT943659.1-201ENSMUST00000215459 326 ntBASIC17.56■□□□□ 0.4
Ddx41Q91VN6 AC090659.1-201ENSMUST00000224334 768 ntBASIC17.56■□□□□ 0.4
Ddx41Q91VN6 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ddx41Q91VN6 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ddx41Q91VN6 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ddx41Q91VN6 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ddx41Q91VN6 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
Ddx41Q91VN6 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ddx41Q91VN6 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ddx41Q91VN6 Gm45133-201ENSMUST00000207548 2773 ntBASIC17.56■□□□□ 0.4
Ddx41Q91VN6 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ddx41Q91VN6 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ddx41Q91VN6 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ddx41Q91VN6 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Ddx41Q91VN6 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ddx41Q91VN6 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
Ddx41Q91VN6 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ddx41Q91VN6 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ddx41Q91VN6 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Ddx41Q91VN6 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ddx41Q91VN6 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ddx41Q91VN6 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ddx41Q91VN6 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
Ddx41Q91VN6 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Ddx41Q91VN6 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ddx41Q91VN6 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Ddx41Q91VN6 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Ddx41Q91VN6 Samd14-201ENSMUST00000055947 3318 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ddx41Q91VN6 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ddx41Q91VN6 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ddx41Q91VN6 Gm4995-201ENSMUST00000117247 432 ntBASIC17.55■□□□□ 0.4
Ddx41Q91VN6 Gm15358-201ENSMUST00000119249 520 ntBASIC17.55■□□□□ 0.4
Ddx41Q91VN6 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC17.55■□□□□ 0.4
Ddx41Q91VN6 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC17.55■□□□□ 0.4
Ddx41Q91VN6 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Ddx41Q91VN6 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ddx41Q91VN6 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC17.55■□□□□ 0.4
Ddx41Q91VN6 Gm45760-201ENSMUST00000212190 1782 ntBASIC17.55■□□□□ 0.4
Ddx41Q91VN6 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ddx41Q91VN6 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Ddx41Q91VN6 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ddx41Q91VN6 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ddx41Q91VN6 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ddx41Q91VN6 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC17.55■□□□□ 0.4
Ddx41Q91VN6 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ddx41Q91VN6 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
Ddx41Q91VN6 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ddx41Q91VN6 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ddx41Q91VN6 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ddx41Q91VN6 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ddx41Q91VN6 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ddx41Q91VN6 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ddx41Q91VN6 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ddx41Q91VN6 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ddx41Q91VN6 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ddx41Q91VN6 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
Ddx41Q91VN6 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ddx41Q91VN6 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Ddx41Q91VN6 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ddx41Q91VN6 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ddx41Q91VN6 Gm6257-201ENSMUST00000163864 910 ntBASIC17.54■□□□□ 0.4
Ddx41Q91VN6 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 54.6 ms