Protein–RNA interactions for Protein: Q91V48

Pcdhb21, MCG1033322, mousemouse

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb21Q91V48 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC15.2■□□□□ 0.02
Pcdhb21Q91V48 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Pcdhb21Q91V48 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Pcdhb21Q91V48 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Pcdhb21Q91V48 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Pcdhb21Q91V48 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Pcdhb21Q91V48 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Pcdhb21Q91V48 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC15.2■□□□□ 0.02
Pcdhb21Q91V48 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Pcdhb21Q91V48 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC15.2■□□□□ 0.02
Pcdhb21Q91V48 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC15.2■□□□□ 0.02
Pcdhb21Q91V48 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Pcdhb21Q91V48 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC15.2■□□□□ 0.02
Pcdhb21Q91V48 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Pcdhb21Q91V48 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Pcdhb21Q91V48 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Pcdhb21Q91V48 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Pcdhb21Q91V48 Ccdc166-201ENSMUST00000182172 2584 ntBASIC15.19■□□□□ 0.02
Pcdhb21Q91V48 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Pcdhb21Q91V48 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Pcdhb21Q91V48 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Pcdhb21Q91V48 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Pcdhb21Q91V48 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Pcdhb21Q91V48 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Pcdhb21Q91V48 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC15.19■□□□□ 0.02
Pcdhb21Q91V48 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
Pcdhb21Q91V48 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Pcdhb21Q91V48 Gm7461-201ENSMUST00000058918 827 ntBASIC15.19■□□□□ 0.02
Pcdhb21Q91V48 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Pcdhb21Q91V48 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Pcdhb21Q91V48 Gm13337-201ENSMUST00000119183 1594 ntBASIC15.19■□□□□ 0.02
Pcdhb21Q91V48 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Pcdhb21Q91V48 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Pcdhb21Q91V48 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Pcdhb21Q91V48 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Pcdhb21Q91V48 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Pcdhb21Q91V48 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Pcdhb21Q91V48 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
Pcdhb21Q91V48 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
Pcdhb21Q91V48 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdhb21Q91V48 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdhb21Q91V48 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdhb21Q91V48 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdhb21Q91V48 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdhb21Q91V48 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdhb21Q91V48 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdhb21Q91V48 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdhb21Q91V48 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdhb21Q91V48 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC15.18■□□□□ 0.02
Pcdhb21Q91V48 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC15.18■□□□□ 0.02
Pcdhb21Q91V48 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdhb21Q91V48 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdhb21Q91V48 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdhb21Q91V48 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC15.18■□□□□ 0.02
Pcdhb21Q91V48 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdhb21Q91V48 Gm37153-201ENSMUST00000193637 231 ntBASIC15.18■□□□□ 0.02
Pcdhb21Q91V48 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC15.18■□□□□ 0.02
Pcdhb21Q91V48 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdhb21Q91V48 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdhb21Q91V48 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdhb21Q91V48 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdhb21Q91V48 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdhb21Q91V48 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdhb21Q91V48 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhb21Q91V48 Crybg1-201ENSMUST00000020017 6608 ntAPPRIS P2 TSL 5 BASIC15.17■□□□□ 0.02
Pcdhb21Q91V48 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhb21Q91V48 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhb21Q91V48 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhb21Q91V48 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhb21Q91V48 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Pcdhb21Q91V48 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
Pcdhb21Q91V48 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhb21Q91V48 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhb21Q91V48 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhb21Q91V48 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC15.17■□□□□ 0.02
Pcdhb21Q91V48 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhb21Q91V48 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhb21Q91V48 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhb21Q91V48 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC15.17■□□□□ 0.02
Pcdhb21Q91V48 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhb21Q91V48 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhb21Q91V48 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhb21Q91V48 Gm18489-201ENSMUST00000172565 551 ntBASIC15.17■□□□□ 0.02
Pcdhb21Q91V48 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC15.17■□□□□ 0.02
Pcdhb21Q91V48 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC15.17■□□□□ 0.02
Pcdhb21Q91V48 Gm7787-201ENSMUST00000216858 688 ntBASIC15.17■□□□□ 0.02
Pcdhb21Q91V48 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhb21Q91V48 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhb21Q91V48 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhb21Q91V48 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC15.17■□□□□ 0.02
Pcdhb21Q91V48 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhb21Q91V48 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhb21Q91V48 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhb21Q91V48 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhb21Q91V48 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
Pcdhb21Q91V48 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhb21Q91V48 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhb21Q91V48 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdhb21Q91V48 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
Pcdhb21Q91V48 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 49.9 ms