Protein–RNA interactions for Protein: Q8VIK1

Snrnp25, U11/U12 small nuclear ribonucleoprotein 25 kDa protein, mousemouse

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snrnp25Q8VIK1 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Snrnp25Q8VIK1 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Snrnp25Q8VIK1 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
Snrnp25Q8VIK1 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
Snrnp25Q8VIK1 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Snrnp25Q8VIK1 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC16.04■□□□□ 0.16
Snrnp25Q8VIK1 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Snrnp25Q8VIK1 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Snrnp25Q8VIK1 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Snrnp25Q8VIK1 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
Snrnp25Q8VIK1 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC16.04■□□□□ 0.16
Snrnp25Q8VIK1 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Snrnp25Q8VIK1 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Snrnp25Q8VIK1 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Snrnp25Q8VIK1 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Snrnp25Q8VIK1 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
Snrnp25Q8VIK1 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Snrnp25Q8VIK1 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Snrnp25Q8VIK1 BC037039-201ENSMUST00000192003 2205 ntBASIC16.03■□□□□ 0.16
Snrnp25Q8VIK1 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Snrnp25Q8VIK1 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Snrnp25Q8VIK1 Gm5366-201ENSMUST00000215494 1338 ntBASIC16.03■□□□□ 0.16
Snrnp25Q8VIK1 AC119177.1-201ENSMUST00000227647 1332 ntBASIC16.03■□□□□ 0.16
Snrnp25Q8VIK1 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Snrnp25Q8VIK1 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
Snrnp25Q8VIK1 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC16.03■□□□□ 0.16
Snrnp25Q8VIK1 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC16.03■□□□□ 0.16
Snrnp25Q8VIK1 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Snrnp25Q8VIK1 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Snrnp25Q8VIK1 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC16.03■□□□□ 0.16
Snrnp25Q8VIK1 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Snrnp25Q8VIK1 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
Snrnp25Q8VIK1 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Snrnp25Q8VIK1 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Snrnp25Q8VIK1 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Snrnp25Q8VIK1 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Snrnp25Q8VIK1 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Snrnp25Q8VIK1 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Snrnp25Q8VIK1 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Snrnp25Q8VIK1 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Snrnp25Q8VIK1 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC16.02■□□□□ 0.16
Snrnp25Q8VIK1 Tfap2a-203ENSMUST00000223869 2037 ntBASIC16.02■□□□□ 0.16
Snrnp25Q8VIK1 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC16.02■□□□□ 0.16
Snrnp25Q8VIK1 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Snrnp25Q8VIK1 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Snrnp25Q8VIK1 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Snrnp25Q8VIK1 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Snrnp25Q8VIK1 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC16.02■□□□□ 0.16
Snrnp25Q8VIK1 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC16.02■□□□□ 0.16
Snrnp25Q8VIK1 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC16.02■□□□□ 0.16
Snrnp25Q8VIK1 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Snrnp25Q8VIK1 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC16.02■□□□□ 0.16
Snrnp25Q8VIK1 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC16.02■□□□□ 0.16
Snrnp25Q8VIK1 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC16.02■□□□□ 0.16
Snrnp25Q8VIK1 Gm18246-201ENSMUST00000221023 728 ntBASIC16.02■□□□□ 0.16
Snrnp25Q8VIK1 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC16.02■□□□□ 0.16
Snrnp25Q8VIK1 CT009510.1-201ENSMUST00000227972 270 ntBASIC16.02■□□□□ 0.16
Snrnp25Q8VIK1 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Snrnp25Q8VIK1 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Snrnp25Q8VIK1 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.15
Snrnp25Q8VIK1 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Snrnp25Q8VIK1 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.15
Snrnp25Q8VIK1 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC16.02■□□□□ 0.15
Snrnp25Q8VIK1 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Snrnp25Q8VIK1 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.15
Snrnp25Q8VIK1 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.15
Snrnp25Q8VIK1 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Snrnp25Q8VIK1 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
Snrnp25Q8VIK1 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Snrnp25Q8VIK1 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Snrnp25Q8VIK1 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Snrnp25Q8VIK1 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC16.01■□□□□ 0.15
Snrnp25Q8VIK1 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Snrnp25Q8VIK1 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Snrnp25Q8VIK1 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Snrnp25Q8VIK1 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Snrnp25Q8VIK1 Gm6443-201ENSMUST00000203599 874 ntBASIC16.01■□□□□ 0.15
Snrnp25Q8VIK1 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
Snrnp25Q8VIK1 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Snrnp25Q8VIK1 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC16.01■□□□□ 0.15
Snrnp25Q8VIK1 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Snrnp25Q8VIK1 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Snrnp25Q8VIK1 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Snrnp25Q8VIK1 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Snrnp25Q8VIK1 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC16.01■□□□□ 0.15
Snrnp25Q8VIK1 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Snrnp25Q8VIK1 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Snrnp25Q8VIK1 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Snrnp25Q8VIK1 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Snrnp25Q8VIK1 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Snrnp25Q8VIK1 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Snrnp25Q8VIK1 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
Snrnp25Q8VIK1 Gm5049-201ENSMUST00000195878 1590 ntBASIC16■□□□□ 0.15
Snrnp25Q8VIK1 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
Snrnp25Q8VIK1 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC16■□□□□ 0.15
Snrnp25Q8VIK1 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Snrnp25Q8VIK1 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Snrnp25Q8VIK1 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Snrnp25Q8VIK1 Gm11839-201ENSMUST00000120647 1953 ntBASIC16■□□□□ 0.15
Snrnp25Q8VIK1 Gm13294-201ENSMUST00000121757 1330 ntBASIC16■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 29.6 ms