Protein–RNA interactions for Protein: Q8VI40

Trim60, Tripartite motif-containing protein 60, mousemouse

Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim60Q8VI40 Gm12497-201ENSMUST00000138778 237 ntBASIC15.86■□□□□ 0.13
Trim60Q8VI40 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC15.86■□□□□ 0.13
Trim60Q8VI40 Gm7286-201ENSMUST00000182691 1007 ntBASIC15.86■□□□□ 0.13
Trim60Q8VI40 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC15.86■□□□□ 0.13
Trim60Q8VI40 Phldb1-201ENSMUST00000034611 5461 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Trim60Q8VI40 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trim60Q8VI40 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trim60Q8VI40 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trim60Q8VI40 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC15.86■□□□□ 0.13
Trim60Q8VI40 Ahdc1-202ENSMUST00000105914 5898 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
Trim60Q8VI40 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trim60Q8VI40 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trim60Q8VI40 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
Trim60Q8VI40 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trim60Q8VI40 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trim60Q8VI40 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Trim60Q8VI40 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trim60Q8VI40 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trim60Q8VI40 Adamts2-201ENSMUST00000040523 7266 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trim60Q8VI40 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trim60Q8VI40 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trim60Q8VI40 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trim60Q8VI40 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trim60Q8VI40 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Trim60Q8VI40 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trim60Q8VI40 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
Trim60Q8VI40 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC15.85■□□□□ 0.13
Trim60Q8VI40 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC15.85■□□□□ 0.13
Trim60Q8VI40 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC15.85■□□□□ 0.13
Trim60Q8VI40 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC15.85■□□□□ 0.13
Trim60Q8VI40 Gm30437-201ENSMUST00000206086 1201 ntBASIC15.85■□□□□ 0.13
Trim60Q8VI40 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC15.85■□□□□ 0.13
Trim60Q8VI40 AC159093.1-201ENSMUST00000227779 380 ntBASIC15.85■□□□□ 0.13
Trim60Q8VI40 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trim60Q8VI40 Gm5357-201ENSMUST00000212720 1924 ntBASIC15.85■□□□□ 0.13
Trim60Q8VI40 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trim60Q8VI40 Dennd4c-201ENSMUST00000045512 5648 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
Trim60Q8VI40 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
Trim60Q8VI40 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trim60Q8VI40 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trim60Q8VI40 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trim60Q8VI40 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Trim60Q8VI40 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC15.84■□□□□ 0.13
Trim60Q8VI40 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
Trim60Q8VI40 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trim60Q8VI40 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Trim60Q8VI40 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
Trim60Q8VI40 Crybg1-201ENSMUST00000020017 6608 ntAPPRIS P2 TSL 5 BASIC15.84■□□□□ 0.13
Trim60Q8VI40 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trim60Q8VI40 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC15.84■□□□□ 0.13
Trim60Q8VI40 Olfr129-201ENSMUST00000122318 993 ntBASIC15.84■□□□□ 0.13
Trim60Q8VI40 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trim60Q8VI40 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC15.84■□□□□ 0.13
Trim60Q8VI40 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trim60Q8VI40 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trim60Q8VI40 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trim60Q8VI40 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trim60Q8VI40 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trim60Q8VI40 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trim60Q8VI40 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trim60Q8VI40 Adamts20-201ENSMUST00000035342 6027 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trim60Q8VI40 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trim60Q8VI40 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trim60Q8VI40 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
Trim60Q8VI40 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Trim60Q8VI40 Eif4g3-203ENSMUST00000084215 8134 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
Trim60Q8VI40 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC15.84■□□□□ 0.13
Trim60Q8VI40 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
Trim60Q8VI40 Adam10-201ENSMUST00000067880 4593 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trim60Q8VI40 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trim60Q8VI40 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC15.83■□□□□ 0.13
Trim60Q8VI40 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.13
Trim60Q8VI40 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.13
Trim60Q8VI40 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Trim60Q8VI40 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
Trim60Q8VI40 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Trim60Q8VI40 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.13
Trim60Q8VI40 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
Trim60Q8VI40 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trim60Q8VI40 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Trim60Q8VI40 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC15.83■□□□□ 0.12
Trim60Q8VI40 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
Trim60Q8VI40 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC15.83■□□□□ 0.12
Trim60Q8VI40 Gm25745-201ENSMUST00000174945 133 ntBASIC15.83■□□□□ 0.12
Trim60Q8VI40 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Trim60Q8VI40 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC15.83■□□□□ 0.12
Trim60Q8VI40 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC15.83■□□□□ 0.12
Trim60Q8VI40 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC15.83■□□□□ 0.12
Trim60Q8VI40 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC15.83■□□□□ 0.12
Trim60Q8VI40 Gm18622-201ENSMUST00000219361 595 ntBASIC15.83■□□□□ 0.12
Trim60Q8VI40 AC158538.2-201ENSMUST00000225455 906 ntBASIC15.83■□□□□ 0.12
Trim60Q8VI40 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trim60Q8VI40 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trim60Q8VI40 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trim60Q8VI40 Tgfbr3-201ENSMUST00000031224 6087 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trim60Q8VI40 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC15.83■□□□□ 0.12
Trim60Q8VI40 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trim60Q8VI40 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trim60Q8VI40 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Trim60Q8VI40 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC15.83■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 21.7 ms