Protein–RNA interactions for Protein: Q8R5L3

Vps39, Vam6/Vps39-like protein, mousemouse

Predictions only

Length 886 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps39Q8R5L3 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Vps39Q8R5L3 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Vps39Q8R5L3 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC15.37■□□□□ 0.05
Vps39Q8R5L3 Fbxo41-201ENSMUST00000159062 6505 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Vps39Q8R5L3 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Vps39Q8R5L3 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Vps39Q8R5L3 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC15.37■□□□□ 0.05
Vps39Q8R5L3 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Vps39Q8R5L3 Gm7506-201ENSMUST00000207758 815 ntBASIC15.37■□□□□ 0.05
Vps39Q8R5L3 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC15.37■□□□□ 0.05
Vps39Q8R5L3 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
Vps39Q8R5L3 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC15.37■□□□□ 0.05
Vps39Q8R5L3 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Vps39Q8R5L3 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Vps39Q8R5L3 Gm38042-201ENSMUST00000191614 5208 ntBASIC15.37■□□□□ 0.05
Vps39Q8R5L3 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Vps39Q8R5L3 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Vps39Q8R5L3 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
Vps39Q8R5L3 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Vps39Q8R5L3 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Vps39Q8R5L3 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Vps39Q8R5L3 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
Vps39Q8R5L3 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Vps39Q8R5L3 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Vps39Q8R5L3 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC15.36■□□□□ 0.05
Vps39Q8R5L3 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Vps39Q8R5L3 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Vps39Q8R5L3 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Vps39Q8R5L3 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Vps39Q8R5L3 Adam10-201ENSMUST00000067880 4593 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Vps39Q8R5L3 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Vps39Q8R5L3 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
Vps39Q8R5L3 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
Vps39Q8R5L3 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Vps39Q8R5L3 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
Vps39Q8R5L3 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Vps39Q8R5L3 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC15.36■□□□□ 0.05
Vps39Q8R5L3 Gm12895-201ENSMUST00000122214 226 ntBASIC15.36■□□□□ 0.05
Vps39Q8R5L3 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC15.36■□□□□ 0.05
Vps39Q8R5L3 Gm7286-201ENSMUST00000182691 1007 ntBASIC15.36■□□□□ 0.05
Vps39Q8R5L3 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Vps39Q8R5L3 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC15.36■□□□□ 0.05
Vps39Q8R5L3 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC15.36■□□□□ 0.05
Vps39Q8R5L3 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Vps39Q8R5L3 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Vps39Q8R5L3 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Vps39Q8R5L3 Ahdc1-202ENSMUST00000105914 5898 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
Vps39Q8R5L3 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Vps39Q8R5L3 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Vps39Q8R5L3 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC15.36■□□□□ 0.05
Vps39Q8R5L3 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC15.36■□□□□ 0.05
Vps39Q8R5L3 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Vps39Q8R5L3 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Vps39Q8R5L3 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Vps39Q8R5L3 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC15.36■□□□□ 0.05
Vps39Q8R5L3 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Vps39Q8R5L3 Pcsk5-201ENSMUST00000025618 6675 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
Vps39Q8R5L3 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Vps39Q8R5L3 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Vps39Q8R5L3 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
Vps39Q8R5L3 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
Vps39Q8R5L3 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Vps39Q8R5L3 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
Vps39Q8R5L3 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Vps39Q8R5L3 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC15.35■□□□□ 0.05
Vps39Q8R5L3 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Vps39Q8R5L3 Gm7935-201ENSMUST00000100555 1278 ntBASIC15.35■□□□□ 0.05
Vps39Q8R5L3 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
Vps39Q8R5L3 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Vps39Q8R5L3 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC15.35■□□□□ 0.05
Vps39Q8R5L3 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC15.35■□□□□ 0.05
Vps39Q8R5L3 AC159093.1-201ENSMUST00000227779 380 ntBASIC15.35■□□□□ 0.05
Vps39Q8R5L3 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Vps39Q8R5L3 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Vps39Q8R5L3 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Vps39Q8R5L3 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Vps39Q8R5L3 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Vps39Q8R5L3 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Vps39Q8R5L3 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Vps39Q8R5L3 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Vps39Q8R5L3 Gm10584-201ENSMUST00000207036 2628 ntBASIC15.35■□□□□ 0.05
Vps39Q8R5L3 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Vps39Q8R5L3 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Vps39Q8R5L3 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Vps39Q8R5L3 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Vps39Q8R5L3 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Vps39Q8R5L3 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Vps39Q8R5L3 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
Vps39Q8R5L3 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
Vps39Q8R5L3 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC15.34■□□□□ 0.05
Vps39Q8R5L3 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC15.34■□□□□ 0.05
Vps39Q8R5L3 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
Vps39Q8R5L3 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC15.34■□□□□ 0.05
Vps39Q8R5L3 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC15.34■□□□□ 0.05
Vps39Q8R5L3 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Vps39Q8R5L3 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC15.34■□□□□ 0.05
Vps39Q8R5L3 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
Vps39Q8R5L3 Gm7977-201ENSMUST00000193787 748 ntBASIC15.34■□□□□ 0.05
Vps39Q8R5L3 Gm7556-201ENSMUST00000201178 1084 ntBASIC15.34■□□□□ 0.05
Vps39Q8R5L3 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC15.34■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 46.1 ms