Protein–RNA interactions for Protein: Q8R4U6

Top1mt, DNA topoisomerase I, mitochondrial, mousemouse

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Top1mtQ8R4U6 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Top1mtQ8R4U6 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
Top1mtQ8R4U6 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Top1mtQ8R4U6 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Top1mtQ8R4U6 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Top1mtQ8R4U6 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Top1mtQ8R4U6 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Top1mtQ8R4U6 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Top1mtQ8R4U6 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC18.32■□□□□ 0.52
Top1mtQ8R4U6 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Top1mtQ8R4U6 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
Top1mtQ8R4U6 Gm5864-201ENSMUST00000202263 970 ntBASIC18.32■□□□□ 0.52
Top1mtQ8R4U6 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
Top1mtQ8R4U6 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Top1mtQ8R4U6 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Top1mtQ8R4U6 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Top1mtQ8R4U6 AC157650.3-201ENSMUST00000225058 1476 ntBASIC18.32■□□□□ 0.52
Top1mtQ8R4U6 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Top1mtQ8R4U6 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC18.32■□□□□ 0.52
Top1mtQ8R4U6 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
Top1mtQ8R4U6 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Top1mtQ8R4U6 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Top1mtQ8R4U6 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
Top1mtQ8R4U6 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Top1mtQ8R4U6 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Top1mtQ8R4U6 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Top1mtQ8R4U6 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC18.31■□□□□ 0.52
Top1mtQ8R4U6 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Top1mtQ8R4U6 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Top1mtQ8R4U6 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Top1mtQ8R4U6 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Top1mtQ8R4U6 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC18.31■□□□□ 0.52
Top1mtQ8R4U6 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Top1mtQ8R4U6 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Top1mtQ8R4U6 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Top1mtQ8R4U6 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Top1mtQ8R4U6 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
Top1mtQ8R4U6 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Top1mtQ8R4U6 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Top1mtQ8R4U6 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Top1mtQ8R4U6 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Top1mtQ8R4U6 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Top1mtQ8R4U6 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Top1mtQ8R4U6 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC18.3■□□□□ 0.52
Top1mtQ8R4U6 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
Top1mtQ8R4U6 Gm7222-201ENSMUST00000117512 906 ntBASIC18.3■□□□□ 0.52
Top1mtQ8R4U6 Gm15173-201ENSMUST00000122049 433 ntBASIC18.3■□□□□ 0.52
Top1mtQ8R4U6 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC18.3■□□□□ 0.52
Top1mtQ8R4U6 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Top1mtQ8R4U6 Gm7230-201ENSMUST00000173026 815 ntBASIC18.3■□□□□ 0.52
Top1mtQ8R4U6 Mir8098-201ENSMUST00000184011 137 ntBASIC18.3■□□□□ 0.52
Top1mtQ8R4U6 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Top1mtQ8R4U6 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Top1mtQ8R4U6 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Top1mtQ8R4U6 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC18.3■□□□□ 0.52
Top1mtQ8R4U6 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Top1mtQ8R4U6 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Top1mtQ8R4U6 Gm10584-201ENSMUST00000207036 2628 ntBASIC18.3■□□□□ 0.52
Top1mtQ8R4U6 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Top1mtQ8R4U6 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Top1mtQ8R4U6 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Top1mtQ8R4U6 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Top1mtQ8R4U6 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Top1mtQ8R4U6 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Top1mtQ8R4U6 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Top1mtQ8R4U6 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
Top1mtQ8R4U6 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Top1mtQ8R4U6 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Top1mtQ8R4U6 Gm37153-201ENSMUST00000193637 231 ntBASIC18.29■□□□□ 0.52
Top1mtQ8R4U6 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Top1mtQ8R4U6 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Top1mtQ8R4U6 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Top1mtQ8R4U6 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
Top1mtQ8R4U6 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
Top1mtQ8R4U6 Gm7901-201ENSMUST00000120430 1597 ntBASIC18.29■□□□□ 0.52
Top1mtQ8R4U6 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Top1mtQ8R4U6 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Top1mtQ8R4U6 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Top1mtQ8R4U6 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Top1mtQ8R4U6 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Top1mtQ8R4U6 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Top1mtQ8R4U6 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC18.28■□□□□ 0.52
Top1mtQ8R4U6 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
Top1mtQ8R4U6 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC18.28■□□□□ 0.52
Top1mtQ8R4U6 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Top1mtQ8R4U6 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Top1mtQ8R4U6 Gm13884-201ENSMUST00000118103 829 ntBASIC18.28■□□□□ 0.52
Top1mtQ8R4U6 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Top1mtQ8R4U6 Gm18489-201ENSMUST00000172565 551 ntBASIC18.28■□□□□ 0.52
Top1mtQ8R4U6 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC18.28■□□□□ 0.52
Top1mtQ8R4U6 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Top1mtQ8R4U6 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Top1mtQ8R4U6 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Top1mtQ8R4U6 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Top1mtQ8R4U6 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Top1mtQ8R4U6 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
Top1mtQ8R4U6 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Top1mtQ8R4U6 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Top1mtQ8R4U6 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC18.28■□□□□ 0.52
Top1mtQ8R4U6 Gm45293-201ENSMUST00000209754 1812 ntBASIC18.28■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 35.2 ms