Protein–RNA interactions for Protein: Q8R4G9

Chrna3, Neuronal acetylcholine receptor subunit alpha-3, mousemouse

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chrna3Q8R4G9 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Chrna3Q8R4G9 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC15.05■□□□□ -0
Chrna3Q8R4G9 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ -0
Chrna3Q8R4G9 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
Chrna3Q8R4G9 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Chrna3Q8R4G9 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Chrna3Q8R4G9 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Chrna3Q8R4G9 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Chrna3Q8R4G9 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
Chrna3Q8R4G9 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
Chrna3Q8R4G9 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Chrna3Q8R4G9 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
Chrna3Q8R4G9 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC15.04■□□□□ -0
Chrna3Q8R4G9 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Chrna3Q8R4G9 AC131586.3-201ENSMUST00000228355 1367 ntBASIC15.04■□□□□ -0
Chrna3Q8R4G9 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Chrna3Q8R4G9 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC15.04■□□□□ -0
Chrna3Q8R4G9 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
Chrna3Q8R4G9 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC15.04■□□□□ -0
Chrna3Q8R4G9 Gm8318-201ENSMUST00000182954 872 ntBASIC15.04■□□□□ -0
Chrna3Q8R4G9 Gm27300-201ENSMUST00000184085 97 ntBASIC15.04■□□□□ -0
Chrna3Q8R4G9 Gm27335-201ENSMUST00000184758 97 ntBASIC15.04■□□□□ -0
Chrna3Q8R4G9 Gm5264-201ENSMUST00000190584 848 ntBASIC15.04■□□□□ -0
Chrna3Q8R4G9 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC15.04■□□□□ -0
Chrna3Q8R4G9 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
Chrna3Q8R4G9 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC15.04■□□□□ -0
Chrna3Q8R4G9 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC15.04■□□□□ -0
Chrna3Q8R4G9 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
Chrna3Q8R4G9 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Chrna3Q8R4G9 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Chrna3Q8R4G9 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Chrna3Q8R4G9 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Chrna3Q8R4G9 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Chrna3Q8R4G9 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Chrna3Q8R4G9 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Chrna3Q8R4G9 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Chrna3Q8R4G9 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Chrna3Q8R4G9 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC15.03■□□□□ -0
Chrna3Q8R4G9 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC15.03■□□□□ -0
Chrna3Q8R4G9 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC15.03■□□□□ -0
Chrna3Q8R4G9 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Chrna3Q8R4G9 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Chrna3Q8R4G9 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC15.03■□□□□ -0
Chrna3Q8R4G9 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Chrna3Q8R4G9 Gm11453-201ENSMUST00000117318 1007 ntBASIC15.03■□□□□ -0
Chrna3Q8R4G9 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC15.03■□□□□ -0
Chrna3Q8R4G9 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC15.03■□□□□ -0
Chrna3Q8R4G9 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC15.03■□□□□ -0
Chrna3Q8R4G9 Gm43332-201ENSMUST00000202511 1044 ntBASIC15.03■□□□□ -0
Chrna3Q8R4G9 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC15.03■□□□□ -0
Chrna3Q8R4G9 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC15.03■□□□□ -0
Chrna3Q8R4G9 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Chrna3Q8R4G9 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Chrna3Q8R4G9 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Chrna3Q8R4G9 Gm38318-201ENSMUST00000195769 1706 ntBASIC15.03■□□□□ -0
Chrna3Q8R4G9 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC15.03■□□□□ -0
Chrna3Q8R4G9 App-207ENSMUST00000227737 2827 ntBASIC15.02■□□□□ -0
Chrna3Q8R4G9 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC15.02■□□□□ -0
Chrna3Q8R4G9 AC157650.3-201ENSMUST00000225058 1476 ntBASIC15.02■□□□□ -0
Chrna3Q8R4G9 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC15.02■□□□□ -0
Chrna3Q8R4G9 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Chrna3Q8R4G9 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Chrna3Q8R4G9 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC15.02■□□□□ -0
Chrna3Q8R4G9 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
Chrna3Q8R4G9 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Chrna3Q8R4G9 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
Chrna3Q8R4G9 Cacng2-201ENSMUST00000019290 5510 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Chrna3Q8R4G9 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC15.02■□□□□ -0
Chrna3Q8R4G9 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
Chrna3Q8R4G9 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC15.02■□□□□ -0
Chrna3Q8R4G9 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC15.02■□□□□ -0
Chrna3Q8R4G9 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC15.02■□□□□ -0
Chrna3Q8R4G9 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC15.02■□□□□ -0
Chrna3Q8R4G9 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC15.02■□□□□ -0
Chrna3Q8R4G9 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Chrna3Q8R4G9 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Chrna3Q8R4G9 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Chrna3Q8R4G9 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Chrna3Q8R4G9 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC15.02□□□□□ -0.01
Chrna3Q8R4G9 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Chrna3Q8R4G9 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Chrna3Q8R4G9 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Chrna3Q8R4G9 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Chrna3Q8R4G9 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Chrna3Q8R4G9 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Chrna3Q8R4G9 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC15.02□□□□□ -0.01
Chrna3Q8R4G9 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Chrna3Q8R4G9 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC15.01□□□□□ -0.01
Chrna3Q8R4G9 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Chrna3Q8R4G9 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC15.01□□□□□ -0.01
Chrna3Q8R4G9 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Chrna3Q8R4G9 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Chrna3Q8R4G9 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Chrna3Q8R4G9 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Chrna3Q8R4G9 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
Chrna3Q8R4G9 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Chrna3Q8R4G9 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Chrna3Q8R4G9 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC15.01□□□□□ -0.01
Chrna3Q8R4G9 AC090659.1-201ENSMUST00000224334 768 ntBASIC15.01□□□□□ -0.01
Chrna3Q8R4G9 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 33.5 ms