Protein–RNA interactions for Protein: Q8R2Q0

Trim29, Tripartite motif-containing protein 29, mousemouse

Predictions only

Length 587 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim29Q8R2Q0 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trim29Q8R2Q0 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Trim29Q8R2Q0 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
Trim29Q8R2Q0 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC17.51■□□□□ 0.39
Trim29Q8R2Q0 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trim29Q8R2Q0 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Trim29Q8R2Q0 AC122024.2-201ENSMUST00000220086 871 ntBASIC17.51■□□□□ 0.39
Trim29Q8R2Q0 Gm6296-201ENSMUST00000222599 943 ntBASIC17.51■□□□□ 0.39
Trim29Q8R2Q0 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
Trim29Q8R2Q0 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trim29Q8R2Q0 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trim29Q8R2Q0 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC17.51■□□□□ 0.39
Trim29Q8R2Q0 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trim29Q8R2Q0 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
Trim29Q8R2Q0 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trim29Q8R2Q0 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trim29Q8R2Q0 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trim29Q8R2Q0 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trim29Q8R2Q0 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trim29Q8R2Q0 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trim29Q8R2Q0 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Trim29Q8R2Q0 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC17.5■□□□□ 0.39
Trim29Q8R2Q0 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trim29Q8R2Q0 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trim29Q8R2Q0 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
Trim29Q8R2Q0 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trim29Q8R2Q0 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Trim29Q8R2Q0 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC17.5■□□□□ 0.39
Trim29Q8R2Q0 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC17.5■□□□□ 0.39
Trim29Q8R2Q0 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trim29Q8R2Q0 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
Trim29Q8R2Q0 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC17.5■□□□□ 0.39
Trim29Q8R2Q0 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC17.5■□□□□ 0.39
Trim29Q8R2Q0 Umpk-ps-201ENSMUST00000211897 827 ntBASIC17.5■□□□□ 0.39
Trim29Q8R2Q0 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC17.5■□□□□ 0.39
Trim29Q8R2Q0 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trim29Q8R2Q0 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trim29Q8R2Q0 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trim29Q8R2Q0 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trim29Q8R2Q0 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC17.5■□□□□ 0.39
Trim29Q8R2Q0 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trim29Q8R2Q0 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trim29Q8R2Q0 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trim29Q8R2Q0 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trim29Q8R2Q0 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
Trim29Q8R2Q0 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trim29Q8R2Q0 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trim29Q8R2Q0 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trim29Q8R2Q0 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trim29Q8R2Q0 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Trim29Q8R2Q0 Gm7153-201ENSMUST00000117092 455 ntBASIC17.49■□□□□ 0.39
Trim29Q8R2Q0 Gm13418-201ENSMUST00000119097 944 ntBASIC17.49■□□□□ 0.39
Trim29Q8R2Q0 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC17.49■□□□□ 0.39
Trim29Q8R2Q0 Gm27646-201ENSMUST00000183989 110 ntBASIC17.49■□□□□ 0.39
Trim29Q8R2Q0 Gm17971-201ENSMUST00000190239 806 ntBASIC17.49■□□□□ 0.39
Trim29Q8R2Q0 Gm44357-201ENSMUST00000195897 142 ntBASIC17.49■□□□□ 0.39
Trim29Q8R2Q0 Gm19658-201ENSMUST00000196231 138 ntBASIC17.49■□□□□ 0.39
Trim29Q8R2Q0 Gm44367-201ENSMUST00000196836 138 ntBASIC17.49■□□□□ 0.39
Trim29Q8R2Q0 Gm44350-201ENSMUST00000197197 138 ntBASIC17.49■□□□□ 0.39
Trim29Q8R2Q0 Gm44390-201ENSMUST00000197533 144 ntBASIC17.49■□□□□ 0.39
Trim29Q8R2Q0 Gm44313-201ENSMUST00000198018 138 ntBASIC17.49■□□□□ 0.39
Trim29Q8R2Q0 Gm44486-201ENSMUST00000198508 138 ntBASIC17.49■□□□□ 0.39
Trim29Q8R2Q0 Gm44314-201ENSMUST00000199263 138 ntBASIC17.49■□□□□ 0.39
Trim29Q8R2Q0 Gm44394-201ENSMUST00000199558 138 ntBASIC17.49■□□□□ 0.39
Trim29Q8R2Q0 Gm44484-201ENSMUST00000199873 138 ntBASIC17.49■□□□□ 0.39
Trim29Q8R2Q0 Gm44466-201ENSMUST00000200264 138 ntBASIC17.49■□□□□ 0.39
Trim29Q8R2Q0 Gm44359-201ENSMUST00000200671 138 ntBASIC17.49■□□□□ 0.39
Trim29Q8R2Q0 Gm7556-201ENSMUST00000201178 1084 ntBASIC17.49■□□□□ 0.39
Trim29Q8R2Q0 Rps4l-201ENSMUST00000071745 943 ntBASIC17.49■□□□□ 0.39
Trim29Q8R2Q0 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trim29Q8R2Q0 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trim29Q8R2Q0 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
Trim29Q8R2Q0 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trim29Q8R2Q0 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trim29Q8R2Q0 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trim29Q8R2Q0 Pcsk5-201ENSMUST00000025618 6675 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
Trim29Q8R2Q0 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trim29Q8R2Q0 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
Trim29Q8R2Q0 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC17.49■□□□□ 0.39
Trim29Q8R2Q0 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trim29Q8R2Q0 Tfap2a-203ENSMUST00000223869 2037 ntBASIC17.48■□□□□ 0.39
Trim29Q8R2Q0 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trim29Q8R2Q0 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trim29Q8R2Q0 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Trim29Q8R2Q0 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Trim29Q8R2Q0 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Trim29Q8R2Q0 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trim29Q8R2Q0 Ahdc1-202ENSMUST00000105914 5898 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Trim29Q8R2Q0 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trim29Q8R2Q0 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trim29Q8R2Q0 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC17.48■□□□□ 0.39
Trim29Q8R2Q0 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trim29Q8R2Q0 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trim29Q8R2Q0 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC17.48■□□□□ 0.39
Trim29Q8R2Q0 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC17.48■□□□□ 0.39
Trim29Q8R2Q0 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Trim29Q8R2Q0 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC17.48■□□□□ 0.39
Trim29Q8R2Q0 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC17.48■□□□□ 0.39
Trim29Q8R2Q0 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trim29Q8R2Q0 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC17.48■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 32.2 ms