Protein–RNA interactions for Protein: Q8R2N0

Ccdc59, Thyroid transcription factor 1-associated protein 26, mousemouse

Known RBP Predictions only

Length 240 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc59Q8R2N0 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Ccdc59Q8R2N0 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ccdc59Q8R2N0 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC14.55□□□□□ -0.08
Ccdc59Q8R2N0 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ccdc59Q8R2N0 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
Ccdc59Q8R2N0 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ccdc59Q8R2N0 Gm13186-201ENSMUST00000118031 316 ntBASIC14.55□□□□□ -0.08
Ccdc59Q8R2N0 Gm11336-201ENSMUST00000118168 334 ntBASIC14.55□□□□□ -0.08
Ccdc59Q8R2N0 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Ccdc59Q8R2N0 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC14.55□□□□□ -0.08
Ccdc59Q8R2N0 Gm17807-201ENSMUST00000186869 298 ntBASIC14.55□□□□□ -0.08
Ccdc59Q8R2N0 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ccdc59Q8R2N0 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Ccdc59Q8R2N0 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
Ccdc59Q8R2N0 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ccdc59Q8R2N0 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ccdc59Q8R2N0 Gfra2-202ENSMUST00000227633 1480 ntBASIC14.55□□□□□ -0.08
Ccdc59Q8R2N0 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ccdc59Q8R2N0 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ccdc59Q8R2N0 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC14.55□□□□□ -0.08
Ccdc59Q8R2N0 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
Ccdc59Q8R2N0 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Ccdc59Q8R2N0 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC14.55□□□□□ -0.08
Ccdc59Q8R2N0 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ccdc59Q8R2N0 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ccdc59Q8R2N0 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Ccdc59Q8R2N0 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ccdc59Q8R2N0 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ccdc59Q8R2N0 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ccdc59Q8R2N0 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ccdc59Q8R2N0 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ccdc59Q8R2N0 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Ccdc59Q8R2N0 Tmed8-201ENSMUST00000037418 7409 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ccdc59Q8R2N0 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ccdc59Q8R2N0 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Ccdc59Q8R2N0 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Ccdc59Q8R2N0 Gm43399-201ENSMUST00000202546 2374 ntBASIC14.54□□□□□ -0.08
Ccdc59Q8R2N0 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ccdc59Q8R2N0 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ccdc59Q8R2N0 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ccdc59Q8R2N0 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ccdc59Q8R2N0 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
Ccdc59Q8R2N0 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ccdc59Q8R2N0 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC14.54□□□□□ -0.08
Ccdc59Q8R2N0 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC14.54□□□□□ -0.08
Ccdc59Q8R2N0 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC14.54□□□□□ -0.08
Ccdc59Q8R2N0 Ank2-226ENSMUST00000189368 339 ntBASIC14.54□□□□□ -0.08
Ccdc59Q8R2N0 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ccdc59Q8R2N0 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ccdc59Q8R2N0 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ccdc59Q8R2N0 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ccdc59Q8R2N0 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Ccdc59Q8R2N0 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Ccdc59Q8R2N0 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ccdc59Q8R2N0 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ccdc59Q8R2N0 Gm45504-201ENSMUST00000211407 2107 ntBASIC14.54□□□□□ -0.08
Ccdc59Q8R2N0 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ccdc59Q8R2N0 Tpr-203ENSMUST00000124973 7430 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ccdc59Q8R2N0 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC14.54□□□□□ -0.08
Ccdc59Q8R2N0 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC14.54□□□□□ -0.08
Ccdc59Q8R2N0 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ccdc59Q8R2N0 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Ccdc59Q8R2N0 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ccdc59Q8R2N0 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ccdc59Q8R2N0 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
Ccdc59Q8R2N0 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ccdc59Q8R2N0 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ccdc59Q8R2N0 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ccdc59Q8R2N0 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Ccdc59Q8R2N0 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ccdc59Q8R2N0 Gm5357-201ENSMUST00000212720 1924 ntBASIC14.53□□□□□ -0.08
Ccdc59Q8R2N0 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ccdc59Q8R2N0 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ccdc59Q8R2N0 Slc8a2-202ENSMUST00000211649 5261 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ccdc59Q8R2N0 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC14.53□□□□□ -0.08
Ccdc59Q8R2N0 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC14.53□□□□□ -0.08
Ccdc59Q8R2N0 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ccdc59Q8R2N0 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ccdc59Q8R2N0 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ccdc59Q8R2N0 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ccdc59Q8R2N0 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ccdc59Q8R2N0 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ccdc59Q8R2N0 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Ccdc59Q8R2N0 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
Ccdc59Q8R2N0 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC14.53□□□□□ -0.08
Ccdc59Q8R2N0 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
Ccdc59Q8R2N0 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ccdc59Q8R2N0 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ccdc59Q8R2N0 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ccdc59Q8R2N0 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Ccdc59Q8R2N0 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Ccdc59Q8R2N0 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Ccdc59Q8R2N0 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Ccdc59Q8R2N0 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.08
Ccdc59Q8R2N0 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Ccdc59Q8R2N0 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Ccdc59Q8R2N0 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
Ccdc59Q8R2N0 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Ccdc59Q8R2N0 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Ccdc59Q8R2N0 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 31.4 ms