Protein–RNA interactions for Protein: Q8R1N4

Nudcd3, NudC domain-containing protein 3, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nudcd3Q8R1N4 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC15.33■□□□□ 0.04
Nudcd3Q8R1N4 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC15.33■□□□□ 0.04
Nudcd3Q8R1N4 Gm43799-201ENSMUST00000201845 579 ntBASIC15.33■□□□□ 0.04
Nudcd3Q8R1N4 Gm18101-201ENSMUST00000215769 548 ntBASIC15.33■□□□□ 0.04
Nudcd3Q8R1N4 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC15.33■□□□□ 0.04
Nudcd3Q8R1N4 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Nudcd3Q8R1N4 Eif4g1-204ENSMUST00000115460 5638 ntAPPRIS P3 TSL 5 BASIC15.33■□□□□ 0.04
Nudcd3Q8R1N4 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Nudcd3Q8R1N4 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Nudcd3Q8R1N4 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
Nudcd3Q8R1N4 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Nudcd3Q8R1N4 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Nudcd3Q8R1N4 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Nudcd3Q8R1N4 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Nudcd3Q8R1N4 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Nudcd3Q8R1N4 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Nudcd3Q8R1N4 Rsbn1l-201ENSMUST00000036489 5550 ntAPPRIS P2 TSL 5 BASIC15.33■□□□□ 0.04
Nudcd3Q8R1N4 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC15.33■□□□□ 0.04
Nudcd3Q8R1N4 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Nudcd3Q8R1N4 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Nudcd3Q8R1N4 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC15.32■□□□□ 0.04
Nudcd3Q8R1N4 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Nudcd3Q8R1N4 Adamts7-201ENSMUST00000113059 5379 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Nudcd3Q8R1N4 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Nudcd3Q8R1N4 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Nudcd3Q8R1N4 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Nudcd3Q8R1N4 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC15.32■□□□□ 0.04
Nudcd3Q8R1N4 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Nudcd3Q8R1N4 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC15.32■□□□□ 0.04
Nudcd3Q8R1N4 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Nudcd3Q8R1N4 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Nudcd3Q8R1N4 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Nudcd3Q8R1N4 Ppip5k2-201ENSMUST00000042509 5882 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Nudcd3Q8R1N4 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Nudcd3Q8R1N4 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Nudcd3Q8R1N4 Cnst-201ENSMUST00000040706 4709 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Nudcd3Q8R1N4 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Nudcd3Q8R1N4 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Nudcd3Q8R1N4 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Nudcd3Q8R1N4 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Nudcd3Q8R1N4 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
Nudcd3Q8R1N4 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC15.32■□□□□ 0.04
Nudcd3Q8R1N4 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Nudcd3Q8R1N4 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Nudcd3Q8R1N4 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Nudcd3Q8R1N4 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Nudcd3Q8R1N4 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
Nudcd3Q8R1N4 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Nudcd3Q8R1N4 Ap5m1-205ENSMUST00000227431 3757 ntBASIC15.31■□□□□ 0.04
Nudcd3Q8R1N4 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Nudcd3Q8R1N4 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Nudcd3Q8R1N4 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Nudcd3Q8R1N4 Diaph2-207ENSMUST00000167619 8439 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Nudcd3Q8R1N4 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Nudcd3Q8R1N4 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Nudcd3Q8R1N4 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Nudcd3Q8R1N4 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC15.31■□□□□ 0.04
Nudcd3Q8R1N4 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC15.31■□□□□ 0.04
Nudcd3Q8R1N4 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
Nudcd3Q8R1N4 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC15.31■□□□□ 0.04
Nudcd3Q8R1N4 AC125350.1-201ENSMUST00000225115 903 ntBASIC15.31■□□□□ 0.04
Nudcd3Q8R1N4 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Nudcd3Q8R1N4 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Nudcd3Q8R1N4 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Nudcd3Q8R1N4 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC15.31■□□□□ 0.04
Nudcd3Q8R1N4 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Nudcd3Q8R1N4 Tsc2-217ENSMUST00000227745 5598 ntAPPRIS ALT2 BASIC15.31■□□□□ 0.04
Nudcd3Q8R1N4 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Nudcd3Q8R1N4 Gm45760-201ENSMUST00000212190 1782 ntBASIC15.31■□□□□ 0.04
Nudcd3Q8R1N4 Fam151a-201ENSMUST00000047620 1923 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Nudcd3Q8R1N4 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Nudcd3Q8R1N4 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Nudcd3Q8R1N4 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Nudcd3Q8R1N4 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
Nudcd3Q8R1N4 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Nudcd3Q8R1N4 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Nudcd3Q8R1N4 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Nudcd3Q8R1N4 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Nudcd3Q8R1N4 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Nudcd3Q8R1N4 Zc3h13-201ENSMUST00000022577 6151 ntAPPRIS P2 TSL 5 BASIC15.3■□□□□ 0.04
Nudcd3Q8R1N4 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Nudcd3Q8R1N4 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Nudcd3Q8R1N4 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Nudcd3Q8R1N4 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Nudcd3Q8R1N4 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Nudcd3Q8R1N4 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC15.3■□□□□ 0.04
Nudcd3Q8R1N4 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
Nudcd3Q8R1N4 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Nudcd3Q8R1N4 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Nudcd3Q8R1N4 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Nudcd3Q8R1N4 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Nudcd3Q8R1N4 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Nudcd3Q8R1N4 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Nudcd3Q8R1N4 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC15.3■□□□□ 0.04
Nudcd3Q8R1N4 Camk2g-217ENSMUST00000226630 1937 ntBASIC15.3■□□□□ 0.04
Nudcd3Q8R1N4 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Nudcd3Q8R1N4 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Nudcd3Q8R1N4 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Nudcd3Q8R1N4 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Nudcd3Q8R1N4 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 69.8 ms