Protein–RNA interactions for Protein: Q8R1M2

H2afj, Histone H2A.J, mousemouse

Predictions only

Length 129 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afjQ8R1M2 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
H2afjQ8R1M2 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
H2afjQ8R1M2 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
H2afjQ8R1M2 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
H2afjQ8R1M2 Eif4ebp2-201ENSMUST00000020288 5784 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
H2afjQ8R1M2 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
H2afjQ8R1M2 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
H2afjQ8R1M2 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
H2afjQ8R1M2 Gm7507-201ENSMUST00000183053 1008 ntBASIC14.26□□□□□ -0.13
H2afjQ8R1M2 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC14.26□□□□□ -0.13
H2afjQ8R1M2 AC130713.1-201ENSMUST00000228853 1096 ntBASIC14.26□□□□□ -0.13
H2afjQ8R1M2 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
H2afjQ8R1M2 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
H2afjQ8R1M2 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
H2afjQ8R1M2 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
H2afjQ8R1M2 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
H2afjQ8R1M2 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
H2afjQ8R1M2 Plxna1-202ENSMUST00000163139 9034 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
H2afjQ8R1M2 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
H2afjQ8R1M2 Epb41l1-202ENSMUST00000103135 6177 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
H2afjQ8R1M2 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
H2afjQ8R1M2 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
H2afjQ8R1M2 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
H2afjQ8R1M2 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
H2afjQ8R1M2 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
H2afjQ8R1M2 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
H2afjQ8R1M2 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
H2afjQ8R1M2 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
H2afjQ8R1M2 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC14.25□□□□□ -0.13
H2afjQ8R1M2 Rprl3-201ENSMUST00000157400 290 ntBASIC14.25□□□□□ -0.13
H2afjQ8R1M2 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
H2afjQ8R1M2 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
H2afjQ8R1M2 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
H2afjQ8R1M2 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
H2afjQ8R1M2 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
H2afjQ8R1M2 Olfr317-202ENSMUST00000215513 2769 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
H2afjQ8R1M2 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
H2afjQ8R1M2 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
H2afjQ8R1M2 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
H2afjQ8R1M2 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
H2afjQ8R1M2 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
H2afjQ8R1M2 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
H2afjQ8R1M2 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
H2afjQ8R1M2 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
H2afjQ8R1M2 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
H2afjQ8R1M2 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
H2afjQ8R1M2 Camta1-211ENSMUST00000169423 5208 ntAPPRIS P2 TSL 5 BASIC14.24□□□□□ -0.13
H2afjQ8R1M2 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
H2afjQ8R1M2 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
H2afjQ8R1M2 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC14.24□□□□□ -0.13
H2afjQ8R1M2 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
H2afjQ8R1M2 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
H2afjQ8R1M2 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
H2afjQ8R1M2 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
H2afjQ8R1M2 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
H2afjQ8R1M2 Gm13312-201ENSMUST00000119631 718 ntBASIC14.24□□□□□ -0.13
H2afjQ8R1M2 Gm1818-201ENSMUST00000169406 1184 ntBASIC14.24□□□□□ -0.13
H2afjQ8R1M2 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
H2afjQ8R1M2 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
H2afjQ8R1M2 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
H2afjQ8R1M2 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
H2afjQ8R1M2 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
H2afjQ8R1M2 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
H2afjQ8R1M2 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
H2afjQ8R1M2 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
H2afjQ8R1M2 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
H2afjQ8R1M2 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
H2afjQ8R1M2 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
H2afjQ8R1M2 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
H2afjQ8R1M2 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
H2afjQ8R1M2 Furin-203ENSMUST00000122232 4286 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
H2afjQ8R1M2 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
H2afjQ8R1M2 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
H2afjQ8R1M2 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
H2afjQ8R1M2 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
H2afjQ8R1M2 Gm38058-201ENSMUST00000194323 4368 ntBASIC14.23□□□□□ -0.13
H2afjQ8R1M2 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
H2afjQ8R1M2 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
H2afjQ8R1M2 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
H2afjQ8R1M2 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
H2afjQ8R1M2 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
H2afjQ8R1M2 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC14.23□□□□□ -0.13
H2afjQ8R1M2 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
H2afjQ8R1M2 Arid4b-203ENSMUST00000110534 5864 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
H2afjQ8R1M2 Diaph2-207ENSMUST00000167619 8439 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
H2afjQ8R1M2 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC14.23□□□□□ -0.13
H2afjQ8R1M2 Gm15794-201ENSMUST00000120182 631 ntBASIC14.23□□□□□ -0.13
H2afjQ8R1M2 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC14.23□□□□□ -0.13
H2afjQ8R1M2 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
H2afjQ8R1M2 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
H2afjQ8R1M2 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC14.23□□□□□ -0.13
H2afjQ8R1M2 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
H2afjQ8R1M2 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
H2afjQ8R1M2 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
H2afjQ8R1M2 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
H2afjQ8R1M2 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
H2afjQ8R1M2 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
H2afjQ8R1M2 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
H2afjQ8R1M2 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
H2afjQ8R1M2 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 37.5 ms