Protein–RNA interactions for Protein: Q8R1C3

Vopp1, Vesicular, overexpressed in cancer, prosurvival protein 1, mousemouse

Predictions only

Length 172 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vopp1Q8R1C3 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Vopp1Q8R1C3 Erdr1-204ENSMUST00000179483 688 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Vopp1Q8R1C3 4930593C16Rik-202ENSMUST00000214011 714 ntTSL 5 BASIC16.1■□□□□ 0.17
Vopp1Q8R1C3 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC16.1■□□□□ 0.17
Vopp1Q8R1C3 AC158529.1-201ENSMUST00000223618 239 ntBASIC16.1■□□□□ 0.17
Vopp1Q8R1C3 Lce1g-201ENSMUST00000029527 925 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Vopp1Q8R1C3 Smim8-201ENSMUST00000029972 786 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Vopp1Q8R1C3 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC16.1■□□□□ 0.17
Vopp1Q8R1C3 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Vopp1Q8R1C3 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC16.1■□□□□ 0.17
Vopp1Q8R1C3 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Vopp1Q8R1C3 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Vopp1Q8R1C3 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Vopp1Q8R1C3 Gm42901-201ENSMUST00000197735 3171 ntBASIC16.1■□□□□ 0.17
Vopp1Q8R1C3 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
Vopp1Q8R1C3 Farp2-202ENSMUST00000122402 2816 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Vopp1Q8R1C3 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Vopp1Q8R1C3 Gm11839-201ENSMUST00000120647 1953 ntBASIC16.09■□□□□ 0.17
Vopp1Q8R1C3 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
Vopp1Q8R1C3 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
Vopp1Q8R1C3 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Vopp1Q8R1C3 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
Vopp1Q8R1C3 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC16.09■□□□□ 0.17
Vopp1Q8R1C3 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC16.09■□□□□ 0.17
Vopp1Q8R1C3 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Vopp1Q8R1C3 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Vopp1Q8R1C3 Hras-203ENSMUST00000124314 1073 ntTSL 5 BASIC16.09■□□□□ 0.17
Vopp1Q8R1C3 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC16.09■□□□□ 0.17
Vopp1Q8R1C3 Gm15458-201ENSMUST00000156950 709 ntTSL 5 BASIC16.09■□□□□ 0.17
Vopp1Q8R1C3 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Vopp1Q8R1C3 Cfd-201ENSMUST00000061653 922 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Vopp1Q8R1C3 Gm10313-201ENSMUST00000095320 1002 ntBASIC16.09■□□□□ 0.17
Vopp1Q8R1C3 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Vopp1Q8R1C3 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Vopp1Q8R1C3 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Vopp1Q8R1C3 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Vopp1Q8R1C3 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Vopp1Q8R1C3 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Vopp1Q8R1C3 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Vopp1Q8R1C3 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Vopp1Q8R1C3 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Vopp1Q8R1C3 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Vopp1Q8R1C3 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Vopp1Q8R1C3 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Vopp1Q8R1C3 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Vopp1Q8R1C3 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Vopp1Q8R1C3 Panct2-202ENSMUST00000188631 625 ntTSL 3 BASIC16.08■□□□□ 0.16
Vopp1Q8R1C3 Klk5-201ENSMUST00000048444 1239 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Vopp1Q8R1C3 Gm42466-201ENSMUST00000202099 1301 ntBASIC16.08■□□□□ 0.16
Vopp1Q8R1C3 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Vopp1Q8R1C3 Nt5dc2-201ENSMUST00000090212 1407 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Vopp1Q8R1C3 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Vopp1Q8R1C3 Arxes2-201ENSMUST00000058119 1532 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
Vopp1Q8R1C3 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Vopp1Q8R1C3 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Vopp1Q8R1C3 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Vopp1Q8R1C3 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Vopp1Q8R1C3 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Vopp1Q8R1C3 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Vopp1Q8R1C3 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
Vopp1Q8R1C3 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC16.07■□□□□ 0.16
Vopp1Q8R1C3 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Vopp1Q8R1C3 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Vopp1Q8R1C3 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Vopp1Q8R1C3 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Vopp1Q8R1C3 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Vopp1Q8R1C3 Gm20650-201ENSMUST00000175690 198 ntTSL 3 BASIC16.07■□□□□ 0.16
Vopp1Q8R1C3 Esd-207ENSMUST00000176957 1117 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Vopp1Q8R1C3 Gm9824-201ENSMUST00000178707 561 ntBASIC16.07■□□□□ 0.16
Vopp1Q8R1C3 Gm27430-201ENSMUST00000184585 107 ntBASIC16.07■□□□□ 0.16
Vopp1Q8R1C3 Gm44333-201ENSMUST00000197168 107 ntBASIC16.07■□□□□ 0.16
Vopp1Q8R1C3 Iqcf3-201ENSMUST00000062917 1131 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Vopp1Q8R1C3 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
Vopp1Q8R1C3 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Vopp1Q8R1C3 Fhad1-201ENSMUST00000036701 1366 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Vopp1Q8R1C3 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Vopp1Q8R1C3 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Vopp1Q8R1C3 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Vopp1Q8R1C3 Cldn14-204ENSMUST00000169391 1456 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
Vopp1Q8R1C3 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC16.07■□□□□ 0.16
Vopp1Q8R1C3 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Vopp1Q8R1C3 Nap1l1-208ENSMUST00000219961 1512 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Vopp1Q8R1C3 Gm42918-201ENSMUST00000199249 1580 ntBASIC16.07■□□□□ 0.16
Vopp1Q8R1C3 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Vopp1Q8R1C3 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
Vopp1Q8R1C3 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Vopp1Q8R1C3 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Vopp1Q8R1C3 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
Vopp1Q8R1C3 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Vopp1Q8R1C3 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Vopp1Q8R1C3 Gm16011-201ENSMUST00000121567 2662 ntBASIC16.06■□□□□ 0.16
Vopp1Q8R1C3 Mtmr7-202ENSMUST00000048898 2488 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Vopp1Q8R1C3 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Vopp1Q8R1C3 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
Vopp1Q8R1C3 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Vopp1Q8R1C3 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC16.06■□□□□ 0.16
Vopp1Q8R1C3 Diablo-202ENSMUST00000111586 719 ntTSL 5 BASIC16.06■□□□□ 0.16
Vopp1Q8R1C3 Zfp637-202ENSMUST00000112859 421 ntTSL 2 BASIC16.06■□□□□ 0.16
Vopp1Q8R1C3 Gm12151-201ENSMUST00000121374 290 ntBASIC16.06■□□□□ 0.16
Vopp1Q8R1C3 Arhgap27os1-201ENSMUST00000130556 923 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 29.1 ms