Protein–RNA interactions for Protein: Q8R0S1

Atf7, Cyclic AMP-dependent transcription factor ATF-7, mousemouse

Predictions only

Length 413 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf7Q8R0S1 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC18.07■□□□□ 0.48
Atf7Q8R0S1 Gm37153-201ENSMUST00000193637 231 ntBASIC18.07■□□□□ 0.48
Atf7Q8R0S1 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
Atf7Q8R0S1 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Atf7Q8R0S1 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
Atf7Q8R0S1 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC18.07■□□□□ 0.48
Atf7Q8R0S1 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Atf7Q8R0S1 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Atf7Q8R0S1 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
Atf7Q8R0S1 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Atf7Q8R0S1 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Atf7Q8R0S1 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
Atf7Q8R0S1 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Atf7Q8R0S1 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Atf7Q8R0S1 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC18.07■□□□□ 0.48
Atf7Q8R0S1 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
Atf7Q8R0S1 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Atf7Q8R0S1 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Atf7Q8R0S1 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Atf7Q8R0S1 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
Atf7Q8R0S1 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC18.06■□□□□ 0.48
Atf7Q8R0S1 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
Atf7Q8R0S1 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
Atf7Q8R0S1 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
Atf7Q8R0S1 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC18.06■□□□□ 0.48
Atf7Q8R0S1 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Atf7Q8R0S1 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
Atf7Q8R0S1 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Atf7Q8R0S1 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Atf7Q8R0S1 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Atf7Q8R0S1 Gm11453-201ENSMUST00000117318 1007 ntBASIC18.06■□□□□ 0.48
Atf7Q8R0S1 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC18.06■□□□□ 0.48
Atf7Q8R0S1 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC18.06■□□□□ 0.48
Atf7Q8R0S1 CT009510.1-201ENSMUST00000227972 270 ntBASIC18.06■□□□□ 0.48
Atf7Q8R0S1 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Atf7Q8R0S1 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC18.06■□□□□ 0.48
Atf7Q8R0S1 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Atf7Q8R0S1 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Atf7Q8R0S1 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Atf7Q8R0S1 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Atf7Q8R0S1 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Atf7Q8R0S1 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Atf7Q8R0S1 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Atf7Q8R0S1 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Atf7Q8R0S1 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Atf7Q8R0S1 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
Atf7Q8R0S1 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC18.05■□□□□ 0.48
Atf7Q8R0S1 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Atf7Q8R0S1 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Atf7Q8R0S1 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Atf7Q8R0S1 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
Atf7Q8R0S1 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Atf7Q8R0S1 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Atf7Q8R0S1 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Atf7Q8R0S1 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Atf7Q8R0S1 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Atf7Q8R0S1 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Atf7Q8R0S1 Gm11452-201ENSMUST00000122376 690 ntBASIC18.05■□□□□ 0.48
Atf7Q8R0S1 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Atf7Q8R0S1 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
Atf7Q8R0S1 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC18.05■□□□□ 0.48
Atf7Q8R0S1 Gm30437-201ENSMUST00000206086 1201 ntBASIC18.05■□□□□ 0.48
Atf7Q8R0S1 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Atf7Q8R0S1 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Atf7Q8R0S1 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Atf7Q8R0S1 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Atf7Q8R0S1 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC18.05■□□□□ 0.48
Atf7Q8R0S1 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Atf7Q8R0S1 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
Atf7Q8R0S1 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC18.04■□□□□ 0.48
Atf7Q8R0S1 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Atf7Q8R0S1 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC18.04■□□□□ 0.48
Atf7Q8R0S1 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Atf7Q8R0S1 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
Atf7Q8R0S1 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Atf7Q8R0S1 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Atf7Q8R0S1 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
Atf7Q8R0S1 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Atf7Q8R0S1 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
Atf7Q8R0S1 Gm15173-201ENSMUST00000122049 433 ntBASIC18.04■□□□□ 0.48
Atf7Q8R0S1 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC18.04■□□□□ 0.48
Atf7Q8R0S1 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Atf7Q8R0S1 Gm10499-201ENSMUST00000174094 934 ntBASIC18.04■□□□□ 0.48
Atf7Q8R0S1 Mir8098-201ENSMUST00000184011 137 ntBASIC18.04■□□□□ 0.48
Atf7Q8R0S1 Gm5253-201ENSMUST00000187104 1025 ntBASIC18.04■□□□□ 0.48
Atf7Q8R0S1 Gm9682-201ENSMUST00000197505 556 ntBASIC18.04■□□□□ 0.48
Atf7Q8R0S1 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC18.04■□□□□ 0.48
Atf7Q8R0S1 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Atf7Q8R0S1 Gm8242-201ENSMUST00000193029 1420 ntBASIC18.04■□□□□ 0.48
Atf7Q8R0S1 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
Atf7Q8R0S1 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC18.04■□□□□ 0.48
Atf7Q8R0S1 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Atf7Q8R0S1 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC18.04■□□□□ 0.48
Atf7Q8R0S1 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Atf7Q8R0S1 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Atf7Q8R0S1 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Atf7Q8R0S1 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
Atf7Q8R0S1 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Atf7Q8R0S1 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Atf7Q8R0S1 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 41.8 ms