Protein–RNA interactions for Protein: Q8K389

Cdk5rap2, CDK5 regulatory subunit-associated protein 2, mousemouse

Predictions only

Length 1,822 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk5rap2Q8K389 Gm11839-201ENSMUST00000120647 1953 ntBASIC20.58■□□□□ 0.89
Cdk5rap2Q8K389 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Cdk5rap2Q8K389 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.88
Cdk5rap2Q8K389 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
Cdk5rap2Q8K389 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Cdk5rap2Q8K389 Zpbp2-201ENSMUST00000017339 1455 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
Cdk5rap2Q8K389 Gm15384-201ENSMUST00000138832 486 ntTSL 5 BASIC20.57■□□□□ 0.88
Cdk5rap2Q8K389 Emd-203ENSMUST00000096424 896 ntTSL 5 BASIC20.57■□□□□ 0.88
Cdk5rap2Q8K389 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
Cdk5rap2Q8K389 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Cdk5rap2Q8K389 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Cdk5rap2Q8K389 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Cdk5rap2Q8K389 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC20.57■□□□□ 0.88
Cdk5rap2Q8K389 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Cdk5rap2Q8K389 Gm13517-201ENSMUST00000120782 1495 ntBASIC20.57■□□□□ 0.88
Cdk5rap2Q8K389 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Cdk5rap2Q8K389 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
Cdk5rap2Q8K389 Gfpt1-202ENSMUST00000113655 1255 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Cdk5rap2Q8K389 Gm45098-201ENSMUST00000207179 657 ntBASIC20.57■□□□□ 0.88
Cdk5rap2Q8K389 Gm7730-201ENSMUST00000212486 454 ntBASIC20.57■□□□□ 0.88
Cdk5rap2Q8K389 Mlf1-202ENSMUST00000077916 1114 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Cdk5rap2Q8K389 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Cdk5rap2Q8K389 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
Cdk5rap2Q8K389 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
Cdk5rap2Q8K389 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Cdk5rap2Q8K389 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Cdk5rap2Q8K389 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Cdk5rap2Q8K389 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Cdk5rap2Q8K389 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Cdk5rap2Q8K389 Jakmip3-201ENSMUST00000106111 1571 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
Cdk5rap2Q8K389 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Cdk5rap2Q8K389 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Cdk5rap2Q8K389 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Cdk5rap2Q8K389 Cdpf1-202ENSMUST00000125947 706 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
Cdk5rap2Q8K389 Gm26854-201ENSMUST00000180418 705 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Cdk5rap2Q8K389 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Cdk5rap2Q8K389 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Cdk5rap2Q8K389 Gm44344-201ENSMUST00000200287 129 ntBASIC20.56■□□□□ 0.88
Cdk5rap2Q8K389 Gm9063-201ENSMUST00000223299 582 ntBASIC20.56■□□□□ 0.88
Cdk5rap2Q8K389 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC20.56■□□□□ 0.88
Cdk5rap2Q8K389 Nap1l1-208ENSMUST00000219961 1512 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Cdk5rap2Q8K389 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Cdk5rap2Q8K389 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Cdk5rap2Q8K389 Gm43195-201ENSMUST00000200614 2332 ntBASIC20.56■□□□□ 0.88
Cdk5rap2Q8K389 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Cdk5rap2Q8K389 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Cdk5rap2Q8K389 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Cdk5rap2Q8K389 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC20.55■□□□□ 0.88
Cdk5rap2Q8K389 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Cdk5rap2Q8K389 Gm15487-201ENSMUST00000122373 465 ntBASIC20.55■□□□□ 0.88
Cdk5rap2Q8K389 Gm24694-201ENSMUST00000180054 110 ntBASIC20.55■□□□□ 0.88
Cdk5rap2Q8K389 Gm27663-201ENSMUST00000184839 110 ntBASIC20.55■□□□□ 0.88
Cdk5rap2Q8K389 Mir6977-201ENSMUST00000184960 64 ntBASIC20.55■□□□□ 0.88
Cdk5rap2Q8K389 Gm37230-201ENSMUST00000194491 818 ntBASIC20.55■□□□□ 0.88
Cdk5rap2Q8K389 Ino80e-214ENSMUST00000206349 883 ntTSL 2 BASIC20.55■□□□□ 0.88
Cdk5rap2Q8K389 Pim2-204ENSMUST00000223553 1113 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Cdk5rap2Q8K389 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC20.55■□□□□ 0.88
Cdk5rap2Q8K389 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
Cdk5rap2Q8K389 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Cdk5rap2Q8K389 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Cdk5rap2Q8K389 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
Cdk5rap2Q8K389 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Cdk5rap2Q8K389 Ccnh-202ENSMUST00000163600 1055 ntTSL 5 BASIC20.55■□□□□ 0.88
Cdk5rap2Q8K389 Wfdc2-201ENSMUST00000017867 849 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Cdk5rap2Q8K389 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Cdk5rap2Q8K389 Gm43548-201ENSMUST00000197139 2353 ntBASIC20.55■□□□□ 0.88
Cdk5rap2Q8K389 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC20.54■□□□□ 0.88
Cdk5rap2Q8K389 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Cdk5rap2Q8K389 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Cdk5rap2Q8K389 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Cdk5rap2Q8K389 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Cdk5rap2Q8K389 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Cdk5rap2Q8K389 Ghr-203ENSMUST00000110698 1171 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Cdk5rap2Q8K389 Tmem109-207ENSMUST00000147699 1096 ntTSL 2 BASIC20.54■□□□□ 0.88
Cdk5rap2Q8K389 Mocs2-207ENSMUST00000166104 1193 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Cdk5rap2Q8K389 1010001B22Rik-201ENSMUST00000181488 589 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Cdk5rap2Q8K389 Gm26808-201ENSMUST00000181569 411 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Cdk5rap2Q8K389 Gm27437-201ENSMUST00000183429 107 ntBASIC20.54■□□□□ 0.88
Cdk5rap2Q8K389 Olfr286-202ENSMUST00000205305 969 ntBASIC20.54■□□□□ 0.88
Cdk5rap2Q8K389 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Cdk5rap2Q8K389 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Cdk5rap2Q8K389 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Cdk5rap2Q8K389 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Cdk5rap2Q8K389 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Cdk5rap2Q8K389 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Cdk5rap2Q8K389 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Cdk5rap2Q8K389 Gm5566-201ENSMUST00000116118 459 ntBASIC20.53■□□□□ 0.88
Cdk5rap2Q8K389 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Cdk5rap2Q8K389 Ccl25-205ENSMUST00000127460 867 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
Cdk5rap2Q8K389 Gldnos-201ENSMUST00000149237 841 ntTSL 2 BASIC20.53■□□□□ 0.88
Cdk5rap2Q8K389 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Cdk5rap2Q8K389 Mrpl27-201ENSMUST00000025278 756 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Cdk5rap2Q8K389 Gm10188-201ENSMUST00000086544 720 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
Cdk5rap2Q8K389 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Cdk5rap2Q8K389 Gm17315-201ENSMUST00000181408 2504 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Cdk5rap2Q8K389 Rps7-ps2-201ENSMUST00000219719 1347 ntBASIC20.53■□□□□ 0.88
Cdk5rap2Q8K389 AC133083.1-201ENSMUST00000221736 2209 ntBASIC20.53■□□□□ 0.88
Cdk5rap2Q8K389 Gm22189-201ENSMUST00000103822 86 ntBASIC20.53■□□□□ 0.88
Cdk5rap2Q8K389 Rpl34-203ENSMUST00000133802 711 ntTSL 2 BASIC20.53■□□□□ 0.88
Cdk5rap2Q8K389 Igfbp4-204ENSMUST00000140772 742 ntTSL 2 BASIC20.53■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 23.4 ms