Protein–RNA interactions for Protein: Q8CIK8

Rfwd3, E3 ubiquitin-protein ligase RFWD3, mousemouse

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfwd3Q8CIK8 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Rfwd3Q8CIK8 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Rfwd3Q8CIK8 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Rfwd3Q8CIK8 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Rfwd3Q8CIK8 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Rfwd3Q8CIK8 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Rfwd3Q8CIK8 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC14.42□□□□□ -0.1
Rfwd3Q8CIK8 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC14.42□□□□□ -0.1
Rfwd3Q8CIK8 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Rfwd3Q8CIK8 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Rfwd3Q8CIK8 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Rfwd3Q8CIK8 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Rfwd3Q8CIK8 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC14.42□□□□□ -0.1
Rfwd3Q8CIK8 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Rfwd3Q8CIK8 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Rfwd3Q8CIK8 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Rfwd3Q8CIK8 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC14.42□□□□□ -0.1
Rfwd3Q8CIK8 Nacc2-201ENSMUST00000028300 6378 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Rfwd3Q8CIK8 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Rfwd3Q8CIK8 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Rfwd3Q8CIK8 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Rfwd3Q8CIK8 Pafah1b1-202ENSMUST00000102520 5789 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Rfwd3Q8CIK8 Ppip5k2-201ENSMUST00000042509 5882 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Rfwd3Q8CIK8 Prkcz2-201ENSMUST00000206136 1756 ntBASIC14.42□□□□□ -0.1
Rfwd3Q8CIK8 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Rfwd3Q8CIK8 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Rfwd3Q8CIK8 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Rfwd3Q8CIK8 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rfwd3Q8CIK8 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rfwd3Q8CIK8 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Rfwd3Q8CIK8 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rfwd3Q8CIK8 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Rfwd3Q8CIK8 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rfwd3Q8CIK8 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rfwd3Q8CIK8 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rfwd3Q8CIK8 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Rfwd3Q8CIK8 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rfwd3Q8CIK8 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rfwd3Q8CIK8 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Rfwd3Q8CIK8 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rfwd3Q8CIK8 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Rfwd3Q8CIK8 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rfwd3Q8CIK8 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Rfwd3Q8CIK8 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rfwd3Q8CIK8 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Rfwd3Q8CIK8 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Rfwd3Q8CIK8 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Rfwd3Q8CIK8 Gm9449-201ENSMUST00000207265 1011 ntBASIC14.41□□□□□ -0.1
Rfwd3Q8CIK8 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC14.41□□□□□ -0.1
Rfwd3Q8CIK8 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Rfwd3Q8CIK8 AC158538.2-201ENSMUST00000225455 906 ntBASIC14.41□□□□□ -0.1
Rfwd3Q8CIK8 Gm7461-201ENSMUST00000058918 827 ntBASIC14.41□□□□□ -0.1
Rfwd3Q8CIK8 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rfwd3Q8CIK8 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rfwd3Q8CIK8 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC14.41□□□□□ -0.1
Rfwd3Q8CIK8 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rfwd3Q8CIK8 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rfwd3Q8CIK8 Adamts15-201ENSMUST00000065112 5928 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rfwd3Q8CIK8 Adamts20-201ENSMUST00000035342 6027 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rfwd3Q8CIK8 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Rfwd3Q8CIK8 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Rfwd3Q8CIK8 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rfwd3Q8CIK8 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rfwd3Q8CIK8 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rfwd3Q8CIK8 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC14.41□□□□□ -0.1
Rfwd3Q8CIK8 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rfwd3Q8CIK8 Gm37500-201ENSMUST00000192059 1443 ntBASIC14.41□□□□□ -0.1
Rfwd3Q8CIK8 Sema6d-208ENSMUST00000103241 6157 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Rfwd3Q8CIK8 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Rfwd3Q8CIK8 Rsbn1l-201ENSMUST00000036489 5550 ntAPPRIS P2 TSL 5 BASIC14.4□□□□□ -0.1
Rfwd3Q8CIK8 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rfwd3Q8CIK8 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC14.4□□□□□ -0.1
Rfwd3Q8CIK8 AC163637.1-201ENSMUST00000215491 1894 ntBASIC14.4□□□□□ -0.1
Rfwd3Q8CIK8 Ino80-201ENSMUST00000049920 6354 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Rfwd3Q8CIK8 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rfwd3Q8CIK8 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rfwd3Q8CIK8 Gapvd1-202ENSMUST00000102800 8339 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rfwd3Q8CIK8 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Rfwd3Q8CIK8 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Rfwd3Q8CIK8 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rfwd3Q8CIK8 AC133083.1-201ENSMUST00000221736 2209 ntBASIC14.4□□□□□ -0.1
Rfwd3Q8CIK8 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rfwd3Q8CIK8 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rfwd3Q8CIK8 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC14.4□□□□□ -0.1
Rfwd3Q8CIK8 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Rfwd3Q8CIK8 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rfwd3Q8CIK8 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Rfwd3Q8CIK8 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC14.4□□□□□ -0.1
Rfwd3Q8CIK8 Mzt1-203ENSMUST00000227948 952 ntBASIC14.4□□□□□ -0.1
Rfwd3Q8CIK8 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rfwd3Q8CIK8 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rfwd3Q8CIK8 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rfwd3Q8CIK8 Gm16011-201ENSMUST00000121567 2662 ntBASIC14.4□□□□□ -0.1
Rfwd3Q8CIK8 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Rfwd3Q8CIK8 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rfwd3Q8CIK8 Fbxo41-202ENSMUST00000161078 6562 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rfwd3Q8CIK8 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Rfwd3Q8CIK8 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rfwd3Q8CIK8 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rfwd3Q8CIK8 Dmxl1-202ENSMUST00000180611 11319 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 43.7 ms